A0A3N5JJI7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Cation acetate symporter
Main knot	4₁ (56%)
Global pLDDT	88.43
Species	Xanthomonadales bacterium
UniProt	A0A3N5JJI7
Structure Prediction Model	AlphaFold v4: A0A3N5JJI7
PDB structures	-
Model length	385
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.7	51-301	251	1-50, 302-385	50	84

Model Sequence

MDLQTLTYIVVGATFALYIGIAFWSRAGSTREFYVAGGGIHPIANGMATAADWMSAASFISMAGLIAFLGYDGSVYLMGWTGGYVLLALLLAPYLRKFGKFTVPEFIGDRYYSKLARLVAVVCLIVASITYVIGQMKGVGVAFGRFLEVDFEVGVLVGMAIVFVYAVLGGMKGITYTQIAQYCVLIFAYTVPAIFIALNLTGNPVPQLGLGDTLADGSGVALLDKLDRIVTDLGFPAYTEQKDSSLNIFLLTLSLMIGTAGLPHVIVRFFTVPRVSDARASAGWALVFIAILYTTAPAVGAMARLNLMDTIQTGEVGATDGNLLYAERPDWFRNWETTGLLRFEDLNGDGRIQYYDDTNPEFAARAAGYGWQGHEMVTVDRDILV

Comments

ESM1

Categories voted by users:

Information

Protein name	Cation acetate symporter
Main knot	4₁ (60%)
Global pLDDT	80.38
Species	Xanthomonadales bacterium
UniProt	A0A3N5JJI7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	385
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.9	53-299	247	1-52, 300-385	52	86

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Xanthomonadales
Species (Full Name)	Xanthomonadales bacterium
Gene	EHM68_16630
PFAM codes	PF00474
InterPro codes	IPR001734, IPR019899, IPR038377
PDB structures (whole Protein)	-

A0A3N5JJI7F1

AF4

Model Sequence

ESM1

Model Sequence