A0A3N5YIE7 | AlphaKnot 2.0

AF4

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Information

Protein name	Sodium:solute symporter
Main knot	4₁ (66%)
Global pLDDT	89.42
Species	Acidobacteria bacterium
UniProt	A0A3N5YIE7
Structure Prediction Model	AlphaFold v4: A0A3N5YIE7
PDB structures	-
Model length	384
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.3	54-288	235	1-53, 289-384	53	96

Model Sequence

MSLLDWIVLAVTLGGVVSYGLWRSRGSRSLDHYVLAGRSMPWYAMALSIMATQASAVTFISTPGQAYVDGMRFVQFYFGLPLAMVVLAFTAVPLFHRARVFTAYEYLERRFDVKTGTLVAAIFLVQRGLALGVTLYAPAVVLSVIFGWPDWQTTLIMGGVAVAVTTLGGVKATAWSHMMQMMVMTAALVAALVCAVVLLPSHVSFRDAVTLAGASGKLNVITTAFDWNDRYNLWSGLFGGMFLALAYFGTDQSQVQRYLTGKSIAESRRGLMFNAAVKIPMQLLILFIGALVYVFYIYQAPPLIFERNDLARIQAQGVGQEYDTVDRRYQSAHEARRLPADAVLEAARRGAAGAEQGARAAYRAAQSDFEAARHEGARLVEAGS

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium:solute symporter
Main knot	4₁ (62%)
Global pLDDT	91.15
Species	Acidobacteria bacterium
UniProt	A0A3N5YIE7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	384
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.6	51-301	251	1-50, 302-384	50	83

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Acidobacteria
Species (Full Name)	Acidobacteria bacterium
Gene	EHM24_07945
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A3N5YIE7F1

AF4

Model Sequence

ESM1

Model Sequence