| Protein name |
GAF domain-containing protein
|
| Main knot |
41 (95%)
|
| Global pLDDT |
78.3
|
| Species |
Acidipila sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3P0X562
|
| PDB structures |
-
|
| Model length |
854
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
88.5 | 70-320 | 251 | 1-69, 321-854 | 69 | 534 |
|
Model Sequence |
MGAAVCRTLLSPERTAPAQIRAQERNATMLEAKPELATATPAPVSGRLSPSPELDLTSCDREPIHIPGSIQPHGFLLGLDPSDHVTVCSRNAADFLQQPLSGIFGRTLPDLVGITAGSRLLDELHSEPLTAAARMLRSITLSGAAPTREFEVVAHRTPGKSALTILEFEHIQASVDVERLNNRLYNFVASIRTLTSIQQICAAAVAEIRELTGCDRVVLYRFDEQGHGLVLAEERVHERFASYLGLRFPASDVPVQARRMYLANRVRIIPNVDYEPSPLLSTAQGSVEAASEIDLSSSVLRSVSPIHRQYMRNMGTICSMSVSIIIDGALWGLVSCHHHEARYVPLRLRSACDFIMQIVASQIESQGNSHQLQQALHAKDLQAVLLAAMAGQEHYMEALTRTPQPLLDLVGADGAAIIVADKVFLVGITPDQEQVQALAEWLQAQSHDAREPALAPEPGHETAGDDVFATSTLSLHYPAAAAFASTGSGLLAISLSKIHNTRLFWFRQELVQSVRWAGDPKKPAEPAPGGSSNNREGVESTTQIAASSANELPANIVHPRHSFESWLQIVRAQSAPWTRAEQQTAAEFRSGVIEIVLRRAEEMAALASGLQVANEELEAFSYSVSHDLRAPFRHISGFSEMLREEEQGRLGERSAQYLATIMDSAKFAGQLVDSLLEFSRFARAQLTVTPIDMEELVDHEWTAIAFDEGRGRTLRFSRSPMPSVLGDNQLLRQVLRNLFSNAIKYTGRCAESVIRMECVPERFTKGTPDSTDKAEATFSITDNGVGFDQQYAGKLFGVFQRLHRFEDFEGTGIGLANVRRIIGRHGGRVWAESEVDKGATFYFTLPLAPLPEEA
|
| Domain |
Bacteria
|
| Family |
Acidobacteriaceae
|
| Species (Full Name) |
Acidipila sp. EB88
|
| Gene |
D1Y84_05310
|
| PFAM codes |
PF00360, PF00512, PF01590, PF02518, PF08446
|
| InterPro codes |
 IPR001294, IPR003018, IPR003594, IPR003661, IPR005467, IPR013515, IPR013654, IPR016132, IPR029016, IPR035965, IPR036097, IPR036890, IPR043150
|
| PDB structures (whole Protein) |
-
|
A0A3P0X562