A0A3P1Y494 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Main knot	3₁#3₁ (76%)
Global pLDDT	88.92
Species	Fretibacterium sp
UniProt	A0A3P1Y494
Structure Prediction Model	AlphaFold v4: A0A3P1Y494
PDB structures	-
Model length	389
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.5	88-364	277	1-87, 365-389	87	25

Model Sequence

MHVTIVTAFPEFFGDFLSTSILGRAVKKGLVRVDLVDLRNFGRGGYRQIDDYSFGSGGMVLAAPPLADALSFASQCGKAARPFVVYPSPQGCVLTQEVIETLASQDHVVILCGHYEGLDERFVEREVDLEVTVGDCVLTGGEIPAMAIVDAMSRLVPGVVGRGEAVAEDSFYRGMLDHPHYTRPASWEGMDVPKVLLGGNAADIRAWRRTRAVERTLARRPDLLSRAAIRDYLGGGAYLALIGDDAPFVSGHVFEVVQLCRTYGLGRPVFIVPNPGAFETISGLPEEFAPKVFGSLARALEWIERKEKDKDLLKVAVLNERRDGALHGLEVKRRCLGCGGPVLFLFPESAEDCGELGPEVLWTGLFGSEGTLPLTIRVAVALDRFLGAR

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Main knot	3₁#3₁ (77%)
Global pLDDT	86.69
Species	Fretibacterium sp
UniProt	A0A3P1Y494
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	389
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.6	88-364	277	1-87, 365-389	87	25

Model Sequence

Comments

Domain	Bacteria
Family	Synergistaceae
Species (Full Name)	Fretibacterium sp. OH1220_COT-178
Gene	trmD EII26_02575
PFAM codes	PF01746
InterPro codes	IPR002649, IPR016009, IPR023148, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A3P1Y494F1

AF4

Model Sequence

ESM1

Model Sequence