| Protein name |
Pectate_lyase_3 domain-containing protein
|
| Main knot |
Unknown (75%)
|
| Global pLDDT |
76.57
|
| Species |
Comamonadaceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3P1Y7X4
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A3P1Y7X4: LS3+++N L-1C
|
| Model length |
825
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
80.2 | 116-698 | 583 | 1-115, 699-825 | 115 | 127 |
|
Model Sequence |
MLALAVSLAACGGGGDGQSDNRPPAPNPAPGPQPDPTPSQPPAPAPVPAPRPPAPAPAPAPAPAPAPAPAPAPAPAPAPAPQPPSPPAPAPSPVPSPAPAPAPPSPPPAPAPTPAPAAEPVPPPTAGVCVPMPASALTVNVKDKGAKGDGQADDTAAIQAALDEAAGSGGRVWIPAGTYMIDATVNACGGWGQERCGLQMRSGVTVHMSQQAVLKAMPNGSRHYNIFHFNDVENAHVLGGHLQGERYAHRIPADGQLGEWGSGLVMRGARHAAIENVTAREFWGDGFYVGGGSQNVKFCAVVADKNRRQGMSIVDVDTIVVQDSVFKNTHGTPPQDGIDIEPWGHAQEALREHVKNVTIRRSQFINNAGRGIGMVTTYPGQIENVVLEGNTIIDNSIGLGLGNRSWKTRITGNRIINSQYLNISLEPLATFITVTDNAITGRPGASLDRLIVDEPNADGSPKHNTIANNRLDTLAAVPLLPPDAAPVVAPAPIPPAPVANPSPTPAPTAGQCAPMPAAGQAINVRDKGAKGDGRSDDTAAIQAAIDQAAGTNGMVWVPEGTYLIDPAKRLFMRSHMTLRLSDQAVLKAKPGSAGFYDIVRFQQVDNARLVGGTVLGDRHTRQGAEGAWGTGVMVAASSRIVIEQVKVQDAWGDGLAVTQDSRDVRLCNVVAEGNRRRGLAIASAQDVLVQGGRYHSTHGVAPMTGIDIRPGKDETIHNVRITQAHVAGNRGYGIYAGVPYEVSASSARVSGVQIEGNTFEPNYLRSVTLERISGSSIRNNRLWHTGLWLTDTTSGNTVTGNYIHSHTILDQGTANSVSGNTLFTP
|
A0A3P1Y7X4
IPR006626