A0A3P2RFB1F1

Oligopeptide ABC transporter substrate-binding protein
AF6
Categories voted by users:
Information
Protein name
Oligopeptide ABC transporter substrate-binding protein
Main knot
84 (47%)
Global pLDDT
89.7
Species
Lactobacillus viridescens
UniProt
Structure Prediction Model
AlphaFold v6:  A0A3P2RFB1
PDB structures
-
Model length
603
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
Model Sequence
MSKGKWIAGVTVAAVVLGGGGYLYYASQHNDNATGGKVGNLNVEYKNDKSVKKGGNLNVAYESDVPFKAQFEAGLMDDATMQQMAAPATGGSVNGGGGIFNADNNFNIQKGGAADISFDKSAKTATVTLRDNLKWSDGKPVTAKDYEFAYEIVANPAYGSSRWTDSLANIEGLSEYHEGKAKSISGITFPDGEGGKTIKIQFKENKPGFKHTGNGYFLESVSPYHYLKDVEPKSLASDPKTTTKPLVIGPFKPEKIVSGESIYYTQNKYYYGKKPNLKSITYTTVDPSKTVASVKAGKYDVVKEASPSVYPQIKKLSNVAVTGQQQLYISMLNFNLGHYDTKKSENVQDRKTPLQDKRVRQAIGYARNVDEVDKKFGNGLQTRANTLIPPIFKDYSDTKLKGYPEDIKKANKLLDEAGWKWDKKHEYREKDGKRLNLTYMARQSNGNSEAIAKNYIQQWKKIGANVTLYKGRLTDFNTYLQITTSPESGAWDLTDAAWSLSSDPSQNDLFSKGAQYNTGHFTSPELTKKLNKIDSSSIKNDKQRAKAFKDYQKYMNDEAYVIPTSFQTDYTPVNKRVANWSMAYGDNNAWSDLGVTSNSPSKN
Comments
AF4
Categories voted by users:
Information
Protein name
Oligopeptide ABC transporter substrate-binding protein
Main knot
84 (50%)
Global pLDDT
90.27
Species
Lactobacillus viridescens
UniProt
Structure Prediction Model
AlphaFold v4:  A0A3P2RFB1
PDB structures
-
Model length
603
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.2 16-594 579 1-15, 595-603 15 9
Model Sequence
MSKGKWIAGVTVAAVVLGGGGYLYYASQHNDNATGGKVGNLNVEYKNDKSVKKGGNLNVAYESDVPFKAQFEAGLMDDATMQQMAAPATGGSVNGGGGIFNADNNFNIQKGGAADISFDKSAKTATVTLRDNLKWSDGKPVTAKDYEFAYEIVANPAYGSSRWTDSLANIEGLSEYHEGKAKSISGITFPDGEGGKTIKIQFKENKPGFKHTGNGYFLESVSPYHYLKDVEPKSLASDPKTTTKPLVIGPFKPEKIVSGESIYYTQNKYYYGKKPNLKSITYTTVDPSKTVASVKAGKYDVVKEASPSVYPQIKKLSNVAVTGQQQLYISMLNFNLGHYDTKKSENVQDRKTPLQDKRVRQAIGYARNVDEVDKKFGNGLQTRANTLIPPIFKDYSDTKLKGYPEDIKKANKLLDEAGWKWDKKHEYREKDGKRLNLTYMARQSNGNSEAIAKNYIQQWKKIGANVTLYKGRLTDFNTYLQITTSPESGAWDLTDAAWSLSSDPSQNDLFSKGAQYNTGHFTSPELTKKLNKIDSSSIKNDKQRAKAFKDYQKYMNDEAYVIPTSFQTDYTPVNKRVANWSMAYGDNNAWSDLGVTSNSPSKN
Comments
Domain Bacteria
Family Lactobacillaceae
Species (Full Name) Weissella viridescens (Lactobacillus viridescens)
Gene D3P96_03250
PFAM codes  PF00496
InterPro codes  IPR000914,  IPR030678,  IPR039424
PDB structures (whole Protein) -
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