A0A3P8R5S9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (80%)
Global pLDDT	82.27
Species	Eastern happy
UniProt	A0A3P8R5S9
Structure Prediction Model	AlphaFold v4: A0A3P8R5S9
PDB structures	-
Model length	359
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.0	9-221	213	1-8, 222-359	8	138

Model Sequence

MSGSAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSMEPENFENLKPVHGLIFLFKWQPGEEPAGSIVQDSRLDHIFFAKQVINNACATQAIISVLLNCSHPDMLLGDTLTEFREFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKDEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYERKIAELQAQLTEDEPMDTDQSSTFLSSIQSEIAKYQLLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEYQQLIPLVEKASQKRRFSSLYSVLKKSSNTSWPAVQKQQKHFEIQTVSFQTLKK

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (78%)
Global pLDDT	83.65
Species	Eastern happy
UniProt	A0A3P8R5S9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	359
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.0	10-221	212	1-9, 222-359	9	138

Model Sequence

Comments

Domain	Eukaryota
Family	Cichlidae
Species (Full Name)	Astatotilapia calliptera (Eastern happy) (Chromis callipterus)
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR033837, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A3P8R5S9F1

AF4

Model Sequence

ESM1

Model Sequence