| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (86%)
|
| Global pLDDT |
90.37
|
| Species |
Pelagibacteraceae bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3R7RS47
|
| PDB structures |
-
|
| Model length |
238
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
87.3 | 81-133 | 53 | 1-80, 134-238 | 80 | 105 |
|
Model Sequence |
MYLNKKLLPEIVLVNTQLPENFGATARCMLNFHFEKLRVINPKFSLDHEKILPVCAGADKVIKKVKIFEKFSDSIKDFNYVIATSNRIRSQKKREISFKKLKEIILNNYKVGIVFGPEKSGLDNEDLSFCDYSIRINSNKNFSSLNLSHAVAIVCYNLFTLLSKRDDSNKKKILENIAKKNELLSFYKILEKSLDKSNFFNVKERKKITFQKIKNIFCKYKLSSEEVRTLISIFKKLS
|
| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (86%)
|
| Global pLDDT |
92.07
|
| Species |
Pelagibacteraceae bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
238
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
97.8 | 83-133 | 51 | 1-82, 134-238 | 82 | 105 |
|
Model Sequence |
MYLNKKLLPEIVLVNTQLPENFGATARCMLNFHFEKLRVINPKFSLDHEKILPVCAGADKVIKKVKIFEKFSDSIKDFNYVIATSNRIRSQKKREISFKKLKEIILNNYKVGIVFGPEKSGLDNEDLSFCDYSIRINSNKNFSSLNLSHAVAIVCYNLFTLLSKRDDSNKKKILENIAKKNELLSFYKILEKSLDKSNFFNVKERKKITFQKIKNIFCKYKLSSEEVRTLISIFKKLS
|
A0A3R7RS47
IPR001537