| Protein name |
GAF domain-containing protein
|
| Main knot |
41 (91%)
|
| Global pLDDT |
85.02
|
| Species |
Paracoccus sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A3T0Q3V5
|
| PDB structures |
-
|
| Model length |
712
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
84.8 | 1-700 | 700 | 701-712 | 0 | 12 |
|
Model Sequence |
MSTALPNPADARDLTACDREPIHVPGSIQAHGHLLIVDPGDGRIVGAAGRADGLTRDMIGQTLSQALGGVLRNAIDDLPDIGPVPLAPVMIDGASWDLLAYRSGAHVVIEMLPALDQPPLDARFLGRMQALDAVLERASSLPDLMRNAAGVFRQLTGHARVMIYRFIDDEAGAVVGESRAEGMGTFMNHHFPASDIPRQARALYVRNRVRVIADVHAPVQPITGSVPGIEAIDLSDSMLRSVSPVHLHYLRNMGVGASASMSIIKDGALWGLVACHHPEPRDLSLATRLACQSLADSLARQIRLREETVLYRERIRLRAHEDTVLARLGPDDQLDQFFAQSAGPLAELVGADGFAAVQGSELFSSGSCPDPAALRHLADHVRQSAAITPFVSSNLERVIPAAAAYRDVASGMLSVTMSTEVPTILMWFRAEKLQVVTWAGNPHKDVPTVPGATLEPRASFAAWSDEVRGKSRPWTAAEVEAASRLVRLMLEARSSRRIRRLNAELSITLRENESLIQQKEFLLREVNHRVQNSLALVASFLRMQGRGADPLVRTQLDEAQSRLSAVSLVHRRLYQDDSAQIVDLAIYLDDLLRDMKSSLDPAWADAIQTEFAPILVSADRAVSIGLLTNEIVANAIKYAYDGQPGPVSVVLSQTRNGMLLSVTDNGVGSDGSIKGTGFGMRMVASLVEQLGGKLQSDTNAPGLRVVITAPLD
|
| Domain |
Bacteria
|
| Family |
Rhodobacteraceae
|
| Species (Full Name) |
Paracoccus sp. Arc7-R13
|
| Gene |
EOJ32_12330
|
| PFAM codes |
PF00360, PF01590, PF02518, PF07568, PF08446
|
| InterPro codes |
 IPR000225, IPR001294, IPR003018, IPR003594, IPR005467, IPR011495, IPR013515, IPR013654, IPR016132, IPR029016, IPR035965, IPR036890, IPR043150
|
| PDB structures (whole Protein) |
-
|
A0A3T0Q3V5