| Protein name |
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
|
| Main knot |
31 (84%)
|
| Global pLDDT |
94.49
|
| Species |
Salmonella derby
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A3V6WA41
|
| PDB structures |
-
|
| Model length |
255
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
97.3 | 86-131 | 46 | 1-85, 132-255 | 85 | 124 |
|
Model Sequence |
MFIGIVSLFPEMFRAITDYGVTGRAVKNGLLNIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGVDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVLGHEASAIEDSFADGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA
|
| Protein name |
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
|
| Main knot |
31 (84%)
|
| Global pLDDT |
89.74
|
| Species |
Salmonella derby
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
255
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
89.2 | 86-131 | 46 | 1-85, 132-255 | 85 | 124 |
|
Model Sequence |
MFIGIVSLFPEMFRAITDYGVTGRAVKNGLLNIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGVDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVLGHEASAIEDSFADGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA
|
| Domain |
Bacteria
|
| Family |
Enterobacteriaceae
|
| Species (Full Name) |
Salmonella derby
|
| Gene |
trmD A2J39_17010 A3071_16505 A3185_23555 A3Z62_18900 A4R56_15955 A6D66_18895 AGP76_22490 AHW28_19390 AL800_03565 APM66_14660 ASI53_18940 AX397_21965 B1280_04040 B7M93_19490 B7N09_16895 B7N53_2148...
|
| PFAM codes |
PF01746
|
| InterPro codes |
IPR002649, IPR016009, IPR023148, IPR029026, IPR029028
|
| PDB structures (whole Protein) |
-
|