| Protein name |
Endonuclease
|
| Main knot |
81 (44%)
|
| Global pLDDT |
86.79
|
| Species |
Sporolactobacillus terrae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A410DDJ5
|
| PDB structures |
-
|
| Model length |
264
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.5 | 21-238 | 218 | 1-20, 239-264 | 20 | 26 |
|
Model Sequence |
MEAFVESGSYKRLKELEKEGRTLRDRVRGCLSSGESRRYEIGSHLVAKFIPKKIYQYDYPGLNEYLYNLGLLQKLTILTSRNLNKDQKLLDLFEPYHLTPEYYVKPSFNRAGQELIKGERTPEVHVTLHDAAIRISQNRSQLKAVKAEYEKLKDELAQSNQLSVNKNVTYKYGSLSLRRKPLRYRIMHRTIQRIIHALIEFGKPSFDGIDHYLYKGIIKKSEFEAFRTLKDVRLDFVILDLDDEAKMQNYFHRKWTNHLLFLNE
|
| Protein name |
Endonuclease
|
| Main knot |
81 (46%)
|
| Global pLDDT |
86.8
|
| Species |
Sporolactobacillus terrae
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
264
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.3 | 20-235 | 216 | 1-19, 236-264 | 19 | 29 |
|
Model Sequence |
MEAFVESGSYKRLKELEKEGRTLRDRVRGCLSSGESRRYEIGSHLVAKFIPKKIYQYDYPGLNEYLYNLGLLQKLTILTSRNLNKDQKLLDLFEPYHLTPEYYVKPSFNRAGQELIKGERTPEVHVTLHDAAIRISQNRSQLKAVKAEYEKLKDELAQSNQLSVNKNVTYKYGSLSLRRKPLRYRIMHRTIQRIIHALIEFGKPSFDGIDHYLYKGIIKKSEFEAFRTLKDVRLDFVILDLDDEAKMQNYFHRKWTNHLLFLNE
|
| Domain |
Bacteria
|
| Family |
Sporolactobacillaceae
|
| Species (Full Name) |
Sporolactobacillus terrae
|
| Gene |
C0679_13240
|
| PDB structures (whole Protein) |
-
|
A0A410DDJ5