A0A415R805 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	LPP20 lipoprotein
Main knot	3₁ (67%)
Global pLDDT	86.1
Species	Mitsuokella sp
UniProt	A0A415R805
Structure Prediction Model	AlphaFold v4: A0A415R805
PDB structures	-
Model length	301
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.6	199-299	101	1-198, 300-301	198	2

Model Sequence

MKVRITKMLSVLMMAALMVAASAASVFASEGPDWSSGTITVEGTGVAPTSAMSGIQARMLARRAAVVDAYRQMAEIIKGVNVDSDTTVENMMVTSDVTKTHVSALIRGAKIVSEKALDDGGYMVTMEIPMYGASNSLASAVLTPSTVKESFPEPQASVAPSQPVGLSGTTMLPSTTEGKLGSSAAAAPAGKAVGGFTGLIVDCRGLGLKPVMSPVIRNDNGQPIYGYKNLDSQTVIANGMASYVSDISRATRAGSNPLVVKAVSVTNHSGDPVISVADANRVLIENGATGFLDRTNVVFLR

Comments

ESM1

Categories voted by users:

Information

Protein name	LPP20 lipoprotein
Main knot	3₁ (66%)
Global pLDDT	86.76
Species	Mitsuokella sp
UniProt	A0A415R805
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	301
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.9	199-299	101	1-198, 300-301	198	2

Model Sequence

Comments

Domain	Bacteria
Family	Selenomonadaceae
Species (Full Name)	Mitsuokella sp. AF33-22
Gene	DWZ54_06835
PFAM codes	PF02169
InterPro codes	IPR024952
PDB structures (whole Protein)	-

A0A415R805F1

AF4

Model Sequence

ESM1

Model Sequence