A0A419F9N0F1

PAS domain S-box protein
AF6
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
86 (91%)
Global pLDDT
71.76
Species
Candidatus Abyssubacteria
UniProt
Structure Prediction Model
AlphaFold v6:  A0A419F9N0
PDB structures
-
Model length
1203
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
71.79 278-1016 739 1-277, 1017-1203 277 187 Knot
Model Sequence
MAREKKRLKILLFEPDDNACGRLHGVLSKIDAWTPEIERAASLEAALKALKRNTHDVCLATSRASELSLRKLLKSATENGHQTPIILIARQKADESICKRMLETGAADYLAGNRIGEALLEQSIRHAIERTRILKAQRESEEKLRVLSEQSLLGVFITKDGRVVFANDVVSKITGYSREEILGAGGEGFLGIVHPEDRAFVCDQARRKKVGDPGAVPRYDVRIITKDGDTKWLSLHSRTIQYNGGNAVEAVILDVTDHKRAEAELKESEARYRLLAGNVSDIIWTTDLNLRLTYVSPSVTRMRGVTYEEAISETIEEILTPASLELAMKLLAEELALEQKKPKDLSRSRAVELEHKCKDGSTVWAEVKVTFLRDDSGQPVGILGITRDISERKRAEEALQERERFLSNIFASIQDGISILDADLTILRTNRIVEQWQPHALPLPGKKCYEAYHGRTSPCEVCPTLQTLKTGQSANEVVPKHAANRKHVGWLDIYTFPLIDTATGTLYGVIEYVRDITERKRAEEALRESEERHRTLVENATDIICTIDVRTGIIANVNSFSERILGYPVENVLNKLNFLDLVHPDDREKVVKRLRDLARDGSRIPNFPLRLKKADDTYIHVEVNGAITYDGKGNPEAFIGVIRDVTEHKRAEDALRGSEERYRTLVNNSLTGICIVQDGRFKFVNDQLTEMSGYTREELLELPFLGLVHPEDQGFSASLAEERIAGQPPTVPHHYRALRKDGTVRWIETFGTLTEYDSRPAALVHLIDITERKQAEERLRASEEKYRTVLDTIEDGFYETDLAGNFTFFNDTIQKVLGHSKEELLGMNYRKYVDEENAKILYQSFNTVYRTGQMNKGFVCYVKEKDGTPRPKEFSVVLVRDNNGKPTGFRGVVRDISERKRAEELLRASEEKYRTLLDTIEDGFYETDLAGNFIFFNNTIVKLLGYSKEELLGMNYRQYCDEHDRKIIYESFNSIYRTGQMKKGFVCTVTCKDGSRRPVEFSVFLVRDDQGKPIGFRGVVRDISERKRAEELLRSSEEKYRTLFEESKDVIYISTPDGRLLDINPAGVDLLGYSCKEELLRIDISRDLYMNAADRKAYQEAVAKRGFVRDYELVFKRKDGQPVNILLTSSAVRDAEGQIVAYRGIMRDMTERKQLEQQLFQAQKMESIGTLAGGVAHDFNNILGGILGYASFMKTKLEKTHTF
Comments
AF4
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
86 (91%)
Global pLDDT
71.86
Species
Candidatus Abyssubacteria
UniProt
Structure Prediction Model
AlphaFold v4:  A0A419F9N0
PDB structures
-
Model length
1203
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
71.8 280-1016 737 1-279, 1017-1203 279 187
Model Sequence
MAREKKRLKILLFEPDDNACGRLHGVLSKIDAWTPEIERAASLEAALKALKRNTHDVCLATSRASELSLRKLLKSATENGHQTPIILIARQKADESICKRMLETGAADYLAGNRIGEALLEQSIRHAIERTRILKAQRESEEKLRVLSEQSLLGVFITKDGRVVFANDVVSKITGYSREEILGAGGEGFLGIVHPEDRAFVCDQARRKKVGDPGAVPRYDVRIITKDGDTKWLSLHSRTIQYNGGNAVEAVILDVTDHKRAEAELKESEARYRLLAGNVSDIIWTTDLNLRLTYVSPSVTRMRGVTYEEAISETIEEILTPASLELAMKLLAEELALEQKKPKDLSRSRAVELEHKCKDGSTVWAEVKVTFLRDDSGQPVGILGITRDISERKRAEEALQERERFLSNIFASIQDGISILDADLTILRTNRIVEQWQPHALPLPGKKCYEAYHGRTSPCEVCPTLQTLKTGQSANEVVPKHAANRKHVGWLDIYTFPLIDTATGTLYGVIEYVRDITERKRAEEALRESEERHRTLVENATDIICTIDVRTGIIANVNSFSERILGYPVENVLNKLNFLDLVHPDDREKVVKRLRDLARDGSRIPNFPLRLKKADDTYIHVEVNGAITYDGKGNPEAFIGVIRDVTEHKRAEDALRGSEERYRTLVNNSLTGICIVQDGRFKFVNDQLTEMSGYTREELLELPFLGLVHPEDQGFSASLAEERIAGQPPTVPHHYRALRKDGTVRWIETFGTLTEYDSRPAALVHLIDITERKQAEERLRASEEKYRTVLDTIEDGFYETDLAGNFTFFNDTIQKVLGHSKEELLGMNYRKYVDEENAKILYQSFNTVYRTGQMNKGFVCYVKEKDGTPRPKEFSVVLVRDNNGKPTGFRGVVRDISERKRAEELLRASEEKYRTLLDTIEDGFYETDLAGNFIFFNNTIVKLLGYSKEELLGMNYRQYCDEHDRKIIYESFNSIYRTGQMKKGFVCTVTCKDGSRRPVEFSVFLVRDDQGKPIGFRGVVRDISERKRAEELLRSSEEKYRTLFEESKDVIYISTPDGRLLDINPAGVDLLGYSCKEELLRIDISRDLYMNAADRKAYQEAVAKRGFVRDYELVFKRKDGQPVNILLTSSAVRDAEGQIVAYRGIMRDMTERKQLEQQLFQAQKMESIGTLAGGVAHDFNNILGGILGYASFMKTKLEKTHTF
Comments
Domain Bacteria
Family PVC group
Species (Full Name) Candidatus Abyssubacteria bacterium SURF_17
Gene C4532_00470
PFAM codes  PF00989,  PF08447,  PF08448,  PF13426
InterPro codes  IPR000014,  IPR000700,  IPR001610,  IPR011006,  IPR013655,  IPR013656,  IPR013767,  IPR035965
PDB structures (whole Protein) -
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