| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (73%)
|
| Global pLDDT |
91.91
|
| Species |
Mangrovibacterium diazotrophicum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A419VZ88
|
| PDB structures |
-
|
| Model length |
230
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.9 | 76-130 | 55 | 1-75, 131-230 | 75 | 100 |
|
Model Sequence |
MKVSFILVEPAVPENVGAAARAMKTMGFADMRLVNPCDHLSEPARWLAHASNDILENALVFPDFEEAVKDLDFIIGTSAKQRGVKEDYYSTRDLVKIIQTKGKSVKHLGIVFGREDSGLRNEELRRCDMVSTVPLQTTYPSLNLAQAIMLYAYELSQIHQSAEIEEKPEVNENGFRALKDKSSKLLLELDFKEESAIYPRILERLNLLGESDIHLLHSICNKYFEKMSKT
|
| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (76%)
|
| Global pLDDT |
90.06
|
| Species |
Mangrovibacterium diazotrophicum
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
230
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
98.3 | 76-130 | 55 | 1-75, 131-230 | 75 | 100 |
|
Model Sequence |
MKVSFILVEPAVPENVGAAARAMKTMGFADMRLVNPCDHLSEPARWLAHASNDILENALVFPDFEEAVKDLDFIIGTSAKQRGVKEDYYSTRDLVKIIQTKGKSVKHLGIVFGREDSGLRNEELRRCDMVSTVPLQTTYPSLNLAQAIMLYAYELSQIHQSAEIEEKPEVNENGFRALKDKSSKLLLELDFKEESAIYPRILERLNLLGESDIHLLHSICNKYFEKMSKT
|
A0A419VZ88
IPR001537