A0A438X109 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Carbonic anhydrase
Main knot	3₁ (71%)
Global pLDDT	93.14
Species	Campylobacter pylori
UniProt	A0A438X109
Structure Prediction Model	AlphaFold v4: A0A438X109
PDB structures	-
Structure in AlphaLasso	A0A438X109: LS_2++C
Model length	247
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.2	52-241	190	1-51, 242-247	51	6

Model Sequence

MKKTFLIALVLTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQDKADLQFKYAASKPKAVFFTHHTLKASFEPTNHINYRGHDYVLDNVHFHAPMEFLINNKTRPLSAHFVHKDAKGRLLVLAIGFEEGKENPNLDPILEGIQKKQNFKEMALDAFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNSPNQRPVQPDYNTVIIKSSAEIR

Comments

ESM1

Categories voted by users:

Information

Protein name	Carbonic anhydrase
Main knot	3₁ (75%)
Global pLDDT	89.83
Species	Campylobacter pylori
UniProt	A0A438X109
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A438X109: LS_2++C
Model length	247
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.6	53-241	189	1-52, 242-247	52	6

Model Sequence

Comments

Domain	Bacteria
Family	Helicobacteraceae
Species (Full Name)	Helicobacter pylori (Campylobacter pylori)
Gene	EC538_07790
PFAM codes	PF00194
InterPro codes	IPR001148, IPR023561, IPR036398, IPR041891
PDB structures (whole Protein)	-

A0A438X109F1

AF4

Model Sequence

ESM1

Model Sequence