A0A443SGA7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (66%)
Global pLDDT	80.03
Species	Leptotrombidium deliense
UniProt	A0A443SGA7
Structure Prediction Model	AlphaFold v4: A0A443SGA7
PDB structures	-
Structure in AlphaLasso	A0A443SGA7: L₀
Model length	375
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.6	101-372	272	1-100, 373-375	100	3

Model Sequence

MQNILRKQMSRGEILVGEKLELRELKDRLVQENRKPTKYGTSNFAFEDASPSPDSSQGEGKLTLDMAAADEKEIRPECEDGRESWDSKLQFMLATIGYAVGLGNVWRFPYLAQKNGGGAFLIPYFIMLAIEGIPVFYLELAVGQRLRKGAIGAWNLVSSYMGGIGISSAVVSFNVALYYNTIIAWCIFYLLHSFQSPLPWSHCKTGFNSNNNECNKSSPTQYFWYRETLNISDDINHPENFNWSIAACLFIAWLLCYGCMIKGIASSGKVVYVTATFPYFVLVAFFFRGITLEGMKDGIIHLFKPNWTKLSDPVVWLEAGTQIFFSLGLGFGGLIAFSSYNPVHNNCYRDAIFVSITNCMTSMFAGIVVFSILDP

Comments

ESM1

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (63%)
Global pLDDT	84.49
Species	Leptotrombidium deliense
UniProt	A0A443SGA7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A443SGA7: L₀
Model length	375
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					64.6	101-372	272	1-100, 373-375	100	3

Model Sequence

Comments

Domain	Eukaryota
Family	Trombiculidae
Species (Full Name)	Leptotrombidium deliense
Gene	B4U80_08664
PFAM codes	PF00209
InterPro codes	IPR000175, IPR037272
PDB structures (whole Protein)	-

A0A443SGA7F1

AF4

Model Sequence

ESM1

Model Sequence