A0A453PQG4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	WAT1-related protein
Main knot	5₂ (65%)
Global pLDDT	77.86
Species	Goatgrass
UniProt	A0A453PQG4
Structure Prediction Model	AlphaFold v4: A0A453PQG4
PDB structures	-
Model length	324
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.6	41-309	269	1-40, 310-324	40	15

Model Sequence

MGMGWKVLTDVKPYLAMVLLQVGFAGMYIIAVASLKAGMSHFVLVVYRNLVATAVMTPFALYFERGRRPKMTTSIVLKIMGLAILEPVIDQNLYFLGAKLTSAGFATALLNTLPAITFLLALILRMEKVRLRSLHSQAKIAGTVLTVAGAVLMMLYHGPAMQFPWTKGQHDATAAVGAVAPRDWLKGTMMLIGSCMVWSCFFILQSSTLRSYPAELSVTALICGMGSLMSAAVALVAERANTQAWVIGFDNRLLTVVYAGIVCSGVAYYLQGVVSRQRGPVFVTAFNPLCMIITAVMGSIILKEEITLGSDHRGRPVLPHLGQE

Comments

ESM1

Categories voted by users:

Information

Protein name	WAT1-related protein
Main knot	5₂ (72%)
Global pLDDT	89.99
Species	Goatgrass
UniProt	A0A453PQG4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	324
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.0	39-304	266	1-38, 305-324	38	20

Model Sequence

Comments

Domain	Eukaryota
Family	Poaceae
Species (Full Name)	Aegilops tauschii subsp. strangulata (Goatgrass)
PFAM codes	PF00892
InterPro codes	IPR000620, IPR030184
PDB structures (whole Protein)	-

A0A453PQG4F1

AF4

Model Sequence

ESM1

Model Sequence