A0A485BV86 | AlphaKnot 2.0

AF4

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Information

Protein name	Permease yicO
Main knot	3₁ (43%)
Global pLDDT	86.29
Species	Kluyvera citrophila
UniProt	A0A485BV86
Structure Prediction Model	AlphaFold v4: A0A485BV86
PDB structures	-
Model length	390
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.6	7-212	206	1-6, 213-390	6	178

Model Sequence

MDKGAATTGTILVFVGGTLLMAFYANLPFIVGPGIGGSVLVGVTLAGSEHIGWPIGLGIACWSGILFFLLTKFGLREVVTRSVPQSIKLGLTASIGLFVAVLGFRNAGLVLANAKTNSLMLGDFLAPGALVALCGLFLAIALQARRIPGAILWAILFATLVGIPAGVTRLPSHFIDVPHSLTPVLGQIDMLGALNIAFLPFLFVFFASEFFSTMGTTLAVGGEAGLLDEEGNMPHINRPFMVDSIAAAVGPWLGIPAATALIESSAAAEAGGKTGLTALAAAVMFLLMLLFTPVALMIPKEATAPALILIGLNMFSGLRKVDLANFTDGLPVLMMVMITLIANSFGTGIAGGLLFYIVIKTIAGKWREIPIGLWILAIPLVYYFATLVRH

Comments

ESM1

Categories voted by users:

Information

Protein name	Permease yicO
Main knot	3₁ (46%)
Global pLDDT	93.4
Species	Kluyvera citrophila
UniProt	A0A485BV86
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	390
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.3	7-257	251	1-6, 258-390	6	133

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Kluyvera cryocrescens (Kluyvera citrophila)
Gene	yicO NCTC12993_05547
PFAM codes	PF00860
InterPro codes	IPR006043, IPR045018
PDB structures (whole Protein)	-

A0A485BV86F1

AF4

Model Sequence

ESM1

Model Sequence