A0A495H3E1F1

YqaJ-like recombinase protein
AF4
Categories voted by users:
Information
Protein name
YqaJ-like recombinase protein
Main knot
61 (56%)
Global pLDDT
91.19
Species
Acidovorax sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A495H3E1
PDB structures
-
Model length
397
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.0 239-393 155 1-238, 394-397 238 4
Model Sequence
MIYVNFKAQSGTPDTAEWHKWRQRGIGGSDAIIIAAAEGLVEPPSWVRHINALFFEKRGYDCFKVQTNEAMRRGTELEPIIRERFERRTGIPLMPSFGECEFNRRIRSSFDGVSFDDRITEIKGSEKCYQRALLQEIPEYYTPQLAHQFLVYHGHPDTWRPDLVGYFCAGHPELEDIATVTYNSGQLQFLARKLLAAEERFIDSLRKNVAPAGGPRFMEFIEKIEPLIREKLAAEELVLGSKQTLVQAMSEGQRVDGFQLKQVTPKPKTDWRAIIEEVGATEDEIDRYRSKPVLAFNCSRAKPLDVPLKDAIGMYHGQVKRLAEAEIQLKPVQEEAKVLMSSLGLDQLVGPYFSVVTRRGTPAYKRWWTERGIDKSIIARHTTDEESESSTLEALPA
Comments
ESM1
Categories voted by users:
Information
Protein name
YqaJ-like recombinase protein
Main knot
61 (53%)
Global pLDDT
83.13
Species
Acidovorax sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
397
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.5 241-391 151 1-240, 392-397 240 6
Model Sequence
MIYVNFKAQSGTPDTAEWHKWRQRGIGGSDAIIIAAAEGLVEPPSWVRHINALFFEKRGYDCFKVQTNEAMRRGTELEPIIRERFERRTGIPLMPSFGECEFNRRIRSSFDGVSFDDRITEIKGSEKCYQRALLQEIPEYYTPQLAHQFLVYHGHPDTWRPDLVGYFCAGHPELEDIATVTYNSGQLQFLARKLLAAEERFIDSLRKNVAPAGGPRFMEFIEKIEPLIREKLAAEELVLGSKQTLVQAMSEGQRVDGFQLKQVTPKPKTDWRAIIEEVGATEDEIDRYRSKPVLAFNCSRAKPLDVPLKDAIGMYHGQVKRLAEAEIQLKPVQEEAKVLMSSLGLDQLVGPYFSVVTRRGTPAYKRWWTERGIDKSIIARHTTDEESESSTLEALPA
Comments
Domain Bacteria
Family Comamonadaceae
Species (Full Name) Acidovorax sp. 94
Gene C8C94_5016
PFAM codes  PF09588
InterPro codes  IPR011335,  IPR011604,  IPR019080
PDB structures (whole Protein) -
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