A0A4D9F569 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (81%)
Global pLDDT	74.09
Species	big-headed turtle
UniProt	A0A4D9F569
Structure Prediction Model	AlphaFold v4: A0A4D9F569
PDB structures	-
Model length	376
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.9	11-223	213	1-10, 224-376	10	153

Model Sequence

MSGGGSAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCIHQDIHLGETLAEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGVCNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQQQLSEEEPMDTDQSGNMLSSIQSEVAKYQMLIEEENQKLKRYKVCIVICFHSKTVRKIIMKSQLDVRPGNEANLMLLHNKAGGIKRVLARHCTTLFTCVNLLLSYWFVHSPSFFLDTWETDILSILLIHFLMYIL

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (79%)
Global pLDDT	76.61
Species	big-headed turtle
UniProt	A0A4D9F569
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	376
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.4	12-223	212	1-11, 224-376	11	153

Model Sequence

Comments

Domain	Eukaryota
Family	Platysternidae
Species (Full Name)	Platysternon megacephalum (big-headed turtle)
Gene	DR999_PMT01681
PFAM codes	PF01088
InterPro codes	IPR001578, IPR033837, IPR036959, IPR038765
PDB structures (whole Protein)	-

A0A4D9F569F1

AF4

Model Sequence

ESM1

Model Sequence