A0A4P2QTP2 | AlphaKnot 2.0

AF4

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Information

Protein name	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Main knot	3₁ (81%)
Global pLDDT	91.27
Species	Polyangium cellulosum
UniProt	A0A4P2QTP2
Structure Prediction Model	AlphaFold v4: A0A4P2QTP2
PDB structures	-
Model length	263
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.6	101-145	45	1-100, 146-263	100	118

Model Sequence

MRIDVVTLFPELFEGFLAIGMVGRALASGALAVRTRSPREFGLGRHRSVDDTPYGGGSGMVMRVDCIVRCLEALDEAAAEGAPPGAEGAPPAPAPRAHRVLLTPQGQPFRQEKAIELAARPAVALVCGRYEGFDERVRAFIDEEISLGDFVMTGGEVAAMAVIDACVRLLPGVLGNAVSAEHESHSPAMSGLLEYPQYTRPVEFRGHKVPEVLQQGNHAAIARWRRAQAEQRTAERRPDLWRKARGGEPPPSPLPNDCGEVRR

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
Main knot	3₁ (83%)
Global pLDDT	92.12
Species	Polyangium cellulosum
UniProt	A0A4P2QTP2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	263
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.0	101-145	45	1-100, 146-263	100	118

Model Sequence

Comments

Domain	Bacteria
Family	Polyangiaceae
Species (Full Name)	Sorangium cellulosum (Polyangium cellulosum)
Gene	trmD SOCE836_058420
PFAM codes	PF01746
InterPro codes	IPR002649, IPR016009, IPR023148, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A4P2QTP2F1

AF4

Model Sequence

ESM1

Model Sequence