| Protein name |
S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
|
| Main knot |
31 (69%)
|
| Global pLDDT |
97.0
|
| Species |
Salmonella derby
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A4Q7HJD8
|
| PDB structures |
-
|
| Model length |
384
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
96.9 | 12-266 | 255 | 1-11, 267-384 | 11 | 118 |
|
Model Sequence |
MAKHLFTSESVSEGHPDKIADQISDAVLDAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGRENFPWEKTDKAQLLRDAAGLK
|
| Protein name |
S-adenosylmethionine synthase (AdoMet synthase) (EC 2.5.1.6) (MAT) (Methionine adenosyltransferase)
|
| Main knot |
31 (70%)
|
| Global pLDDT |
88.61
|
| Species |
Salmonella derby
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
384
|
| ESM generation time |
2023-06-27: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.2 | 12-263 | 252 | 1-11, 264-384 | 11 | 121 |
|
Model Sequence |
MAKHLFTSESVSEGHPDKIADQISDAVLDAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGRENFPWEKTDKAQLLRDAAGLK
|
| Domain |
Bacteria
|
| Family |
Enterobacteriaceae
|
| Species (Full Name) |
Salmonella derby
|
| Gene |
metK A2J39_14290 A3071_12725 A3Z62_14185 A4R56_05545 A6D66_09540 AGP76_08870 AHW28_19110 AL800_12050 APM66_08520 ASI53_01730 AX397_21685 B1280_09770 B7M71_05865 B7M84_01335 B7M93_10305 B7N09_1457...
|
| PFAM codes |
PF00438, PF02772, PF02773
|
| InterPro codes |
 IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
|
| PDB structures (whole Protein) |
-
|
A0A4Q7HJD8