A0A4R1MXB5F1

Type I restriction endonuclease subunit R
AF4
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Information
Protein name
Type I restriction endonuclease subunit R
Main knot
83 (44%)
Global pLDDT
90.16
Species
Natranaerovirga hydrolytica
UniProt
Structure Prediction Model
AlphaFold v4:  A0A4R1MXB5
PDB structures
-
Model length
457
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Knot map - computed using the Web Server in job: a47facba3efc4e

Knot cutoff: 30%


Help Knotting data interpretation
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
None 16-450 435 1-15, 451-457 Knot
89.8 36-413 378 1-35, 414-457 Knot
89.7 92-432 341 1-91, 433-457 1-42,447-457 43-91,433-446 Slipknot
Model Sequence
MNLNKAKKQLEKGENISESLEIIVDNQKTLYYNYALVNFAFEYIVLGTKIDDYLTNKESEWIILKIKDITERVVLDKNIDESLLKEIDSLRKNISKKLEVLTTYVDELEIYEYIVNRQENNQDFISNEEVFAKEIVSFVFASKDNVTINQKLKEVLEQLPMRLTKAKFFDYIQDSLTLYKGTPEDKLIDLLSILEKIYSPEKNEGYGEEFEDIYALVNKIKSKVSKNMEDQTIAEVKEDFLYVSTVLKENVDRYLDAIKVTNLLYTMMVCFGKNIEPNANAIKIIKEVQEKWHENNEDIIENLINELGQLEGVQEDLNFTIQKNESSIDLAVNDYYAVYKNTLIEKDINNVKTAQSLTSSSFFVDLEESNEPSNVLDDKKIYELVNAFLNQIEIEMKKDDMIIRRAKMSKIIATLPTFFKEAEAIYEYIAFAFNQCRDQREKTASISLIKELMEDYE
Knot Pull simplified model computed using the Web Server in job: a47facba3efc4e
Comments
Domain Bacteria
Family Eubacteriales incertae sedis
Species (Full Name) Natranaerovirga hydrolytica
Gene EDC19_0248
PDB structures (whole Protein) -

Identical Structures in AlphaKnot - computed using the Web Server in job: a47facba3efc4e
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
A0A4R1MXB5
92.3 %
457
83 (44%)
N/A
Natranaerovirga hydrolytica
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