| Protein name |
GAF domain-containing protein
|
| Main knot |
41 (86%)
|
| Global pLDDT |
86.94
|
| Species |
Mycobacterium paragordonae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A4R5WUP3
|
| PDB structures |
-
|
| Model length |
750
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.8 | 1-741 | 741 | 742-750 | 0 | 9 |
|
Model Sequence |
MPDGQTVPDLLPVGTPIDLDNCAREPIHIPGSIQPRGVLAVVREPDFEVRQVSANVAEVLGRSVADVVGRPLSVLMGAEQASRVEQAAATFGDLSQRNPLECDIDVNGQSRAFDAILHRGPGGVLLVEIEIAYGERPFSFPNTYQAVRSSVEELNRADSLAELYAIAARAVRDLTGFDRVMVYRYDQDYNGEVVAECKREDLNSFLGLHYPSTDIPAQARALYEKNWLRLIDDVDYTPAPLVPAMDPDSGAPLDLTHATLRSVSPIHIEYLQNMGVHASMSISLLRHGRLWGLIACHHYAGPHLPPFGTRAAAEFLGSTLSLRLVDRFEGDQLHKRLSAQAVLAKLTAAALDDGEPLSAALLGAPDLLDLVPADGVVVDIQGDYRTHGSVPPQQIVSAVAAWARGAGDEIASTDCLAHELPELNLDQQLAAGALVLNLPDGQCAIWFRREVLRSVDWGGDPHNKTIVRGEGDEVRLSPRKSFDRWREVVRLRSDPWTLSETESAESLRRHLVEALYRRTRGALRVAERVQRSLLPESIPTLPDWHLSAHYEPAAGDNVGGDWYDAFELRDGRLVVLIGDVAGHGITAAGTMAQLRNALRALLFAGATPADALAQLNDFCLHMMPGAFATVVAARVDLSSGDVEAACAGHLKPYLTNAAPSATQAPIRLSPPIGIKGVRYEPSAFTVEPGHGLVLYSDGLVERRGESIDDGLDRLAQTLGRANTAPASWIWTEMASGNIDDDVTVVALRRP
|
| Domain |
Bacteria
|
| Family |
Mycobacteriaceae
|
| Species (Full Name) |
Mycobacterium paragordonae
|
| Gene |
EUA02_11225
|
| PFAM codes |
PF00360, PF01590, PF07228, PF08446
|
| InterPro codes |
 IPR001294, IPR001932, IPR003018, IPR013515, IPR013654, IPR016132, IPR029016, IPR035965, IPR036457, IPR043150
|
| PDB structures (whole Protein) |
-
|
A0A4R5WUP3