| Protein name |
Transcriptional regulator
|
| Main knot |
81 (63%)
|
| Global pLDDT |
88.69
|
| Species |
Paenibacillus amylolyticus
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A4R5ZK00
|
| PDB structures |
-
|
| Model length |
279
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.4 | 26-260 | 235 | 1-25, 261-279 | 25 | 19 |
|
Model Sequence |
MSIESVIHFVESSSYKEMHRSVTKVNFLRQLISDYQASLGLNRLEWTPHDVVGKFFATKQYDMKNEQLYELLDSHGVLPKVVRIKWNWLNKSDQDSLQECRLASKPYLRFTPKRIDQEQREGGLISYRNDLANYDIYGLLDKWKHQKWIYSRLFDQWNALLISAQTEMQKTKQFKISLFEGKLSVVTPDPYVDTIAAFQWGGTELLLRCGKIDMEQVKLFVAKGYFSMTQVQEHLKVIGVSTKYILQTLTSERNMMEGMIQQSNRYSCMNRLSQEGWKV
|
| Protein name |
Transcriptional regulator
|
| Main knot |
81 (59%)
|
| Global pLDDT |
89.5
|
| Species |
Paenibacillus amylolyticus
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
279
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.6 | 25-244 | 220 | 1-24, 245-279 | 24 | 35 |
|
Model Sequence |
MSIESVIHFVESSSYKEMHRSVTKVNFLRQLISDYQASLGLNRLEWTPHDVVGKFFATKQYDMKNEQLYELLDSHGVLPKVVRIKWNWLNKSDQDSLQECRLASKPYLRFTPKRIDQEQREGGLISYRNDLANYDIYGLLDKWKHQKWIYSRLFDQWNALLISAQTEMQKTKQFKISLFEGKLSVVTPDPYVDTIAAFQWGGTELLLRCGKIDMEQVKLFVAKGYFSMTQVQEHLKVIGVSTKYILQTLTSERNMMEGMIQQSNRYSCMNRLSQEGWKV
|
| Domain |
Bacteria
|
| Family |
Paenibacillaceae
|
| Species (Full Name) |
Paenibacillus amylolyticus
|
| Gene |
E2R58_09455
|
| PDB structures (whole Protein) |
-
|
A0A4R5ZK00