A0A4S0VFE5 | AlphaKnot 2.0

AF4

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Information

Protein name	UbiA family prenyltransferase
Main knot	3₁ (81%)
Global pLDDT	91.49
Species	Mesorhizobium sp
UniProt	A0A4S0VFE5
Structure Prediction Model	AlphaFold v4: A0A4S0VFE5
PDB structures	-
Model length	381
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.0	67-360	294	1-66, 361-381	66	21

Model Sequence

MALDLSVETTARKAATPPGRYLFGPVADFLMLGGSAFLILPVLFFVPREYEGPLAATMVVVAYLVNYPHFAHSYQIFYRNFGRKARGEGYDRSLQLRYIFAGVIVPVIMALFFAYGAATSNTRLLGFAANAMFFFVGWHYVKQGYGMLMVDAVLKRKCFDDRDKKVLLVNSYAVWILAWLQTNTAVTQGQYYGLQYYTFAAPSWITDIAVLAAVGSTAATVLMLINRWRRNGGGLPYNGIVAYSASLYLWILIARINPLWLLVVPALHSLQYLAVVWRYQTNVERDVSDAASDPEPKILSVLGPRYRLRVLGFIIGGGALGYLGFWLIPFVLTALVPYDKQVLGSSLFFFIVLIFINVHHYFLDNVMWRRGNPEVSKYLFR

Comments

ESM1

Categories voted by users:

Information

Protein name	UbiA family prenyltransferase
Main knot	3₁ (79%)
Global pLDDT	83.09
Species	Mesorhizobium sp
UniProt	A0A4S0VFE5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	381
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.7	60-360	301	1-59, 361-381	59	21

Model Sequence

Comments

Domain	Bacteria
Family	Phyllobacteriaceae
Species (Full Name)	Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1
Gene	EN809_034200
PDB structures (whole Protein)	-

A0A4S0VFE5F1

AF4

Model Sequence

ESM1

Model Sequence