A0A4V1U507 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid permease
Main knot	4₁ (56%)
Global pLDDT	87.87
Species	Cytophagaceae bacterium
UniProt	A0A4V1U507
Structure Prediction Model	AlphaFold v4: A0A4V1U507
PDB structures	-
Model length	302
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.2	39-289	251	1-38, 290-302	38	13

Model Sequence

MRIKSLERLRQEAAASDSSTLKRSLGAFNLVAIGIGVIIGAGLFSLTGIAAANHAGPAVTLSFVVAAVGCAFSALCYAEFAAMVPISGSAYTYAYATLGELFAWIIGWDLVLEYSVGAATVAISWSQYLNRFLSNYGLHVPPQLMLSPFETATGADGSVVTGFMNVPAVLIVVLITSIIIRGTSGSAIFNAIVVTLKVLVVLVFIALGWQYIDPANYQPYIPANTGTFGEYGWSGVLRGAGVVFFVFIGFDIVATMAQEAKNPQRDMPIGIIGSLVVCTILFVLFGYVMTGMANYTEFKNSA

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (62%)
Global pLDDT	90.95
Species	Cytophagaceae bacterium
UniProt	A0A4V1U507
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	302
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.2	39-289	251	1-38, 290-302	38	13

Model Sequence

Comments

Domain	Bacteria
Family	Cytophagaceae
Species (Full Name)	Cytophagaceae bacterium
Gene	EOO39_30280
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A4V1U507F1

AF4

Model Sequence

ESM1

Model Sequence