A0A4V2S338F1

TrmH RNA methyltransferase
AF4
Categories voted by users:
Information
Protein name
TrmH RNA methyltransferase
Main knot
31 (85%)
Global pLDDT
81.79
Species
Dokdonella fugitiva
UniProt
Structure Prediction Model
AlphaFold v4:  A0A4V2S338
PDB structures
-
Model length
322
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.4 251-293 43 1-250, 294-322 250 29
Model Sequence
MAKDPRNDSPWAGAKPRTERVSKREREALAARAPGPRPRDDRDGGRRDVRRDVPPPARDPRRAATAPASPEAARDPASREQRLYGLNACLAAFARRPEALRKVYLSEARIGALRTVLAWCVQRRIGYRVVETGDLDRLAASRHHEGVCFDLLRPEPLALAALLDAQPPAPQASLLLWLDGVGNPHNLGALLRSAAHFGAGGVIVPAQAGLDVSGAAARVAEGAAEVVPLVQADDAQHALRELHARGYVLAATVPRDGSPLYATTLPRRLVLVLGAEGEGTSEAMIGSADLRLTIPGSGAIESLNVAASVAVLLGEYWRQAHA
Comments
ESM1
Categories voted by users:
Information
Protein name
TrmH RNA methyltransferase
Main knot
31 (83%)
Global pLDDT
87.98
Species
Dokdonella fugitiva
UniProt
Structure Prediction Model
PDB structures
-
Model length
322
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
73.6 251-293 43 1-250, 294-322 250 29
Model Sequence
MAKDPRNDSPWAGAKPRTERVSKREREALAARAPGPRPRDDRDGGRRDVRRDVPPPARDPRRAATAPASPEAARDPASREQRLYGLNACLAAFARRPEALRKVYLSEARIGALRTVLAWCVQRRIGYRVVETGDLDRLAASRHHEGVCFDLLRPEPLALAALLDAQPPAPQASLLLWLDGVGNPHNLGALLRSAAHFGAGGVIVPAQAGLDVSGAAARVAEGAAEVVPLVQADDAQHALRELHARGYVLAATVPRDGSPLYATTLPRRLVLVLGAEGEGTSEAMIGSADLRLTIPGSGAIESLNVAASVAVLLGEYWRQAHA
Comments
Domain Bacteria
Family Rhodanobacteraceae
Species (Full Name) Dokdonella fugitiva
Gene EV148_101247
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR004441,  IPR013123,  IPR016479,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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