A0A4W3KGK3F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (83%)
Global pLDDT
87.54
Species
Ghost shark
UniProt
Structure Prediction Model
AlphaFold v4:  A0A4W3KGK3
PDB structures
-
Model length
333
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.1 13-225 213 1-12, 226-333 12 108
Model Sequence
TAGEMAGNAGEWCLMESDPGVFTELIKGFGCKGVQVEEIWSLEPEHFDKLKPVHGLIFLFKWQPGEEPAGSIVQDSRLEKIFFAKQVINNACATQAIISVLLNCNHSDIELGETLGEFKEFSQSFDAAMKGLALSNSEVIRQVHNGFARQQMFEFDAKTAGKEEDAFHFVSYFPVNGRLYEHDGLREGPIDLGTCNQDDWVSAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMVYEKKITELQRQLTEEEPMDTDQSSSLINSIQSEVAKYQMLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQEAK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (85%)
Global pLDDT
80.17
Species
Ghost shark
UniProt
Structure Prediction Model
PDB structures
-
Model length
333
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
74.9 14-225 212 1-13, 226-333 13 108
Model Sequence
TAGEMAGNAGEWCLMESDPGVFTELIKGFGCKGVQVEEIWSLEPEHFDKLKPVHGLIFLFKWQPGEEPAGSIVQDSRLEKIFFAKQVINNACATQAIISVLLNCNHSDIELGETLGEFKEFSQSFDAAMKGLALSNSEVIRQVHNGFARQQMFEFDAKTAGKEEDAFHFVSYFPVNGRLYEHDGLREGPIDLGTCNQDDWVSAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMVYEKKITELQRQLTEEEPMDTDQSSSLINSIQSEVAKYQMLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQEAK
Comments
Domain Eukaryota
Family Callorhinchidae
Species (Full Name) Callorhinchus milii (Ghost shark)
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR033837,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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