A0A4W6FAG3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (96%)
Global pLDDT	76.15
Species	Barramundi
UniProt	A0A4W6FAG3
Structure Prediction Model	AlphaFold v4: A0A4W6FAG3
PDB structures	-
Model length	323
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.6	187-233	47	1-186, 234-323	186	90

Model Sequence

MADDSVKGEASAQQQRDDGDNKKTVGSNGEGAAENQTMSKRQMKKLLKQQKWEEERELRKQRRKERKQQRRLQRQNHQEEEEEGGDAQSARKRPRREVTPSSLRLVVDCSFDNLMLIKDVRKLHKQIQRCYAENRRAVHPVQFYLTSLGGQLKQSMDEKDKGWVNWKDITIKTEHYSEVVAKEDLVYLTSDSPNVLEELDQKKAYVIGGLVDHNHHKGITFEKAKELGINHAQLPLSSFVKMNSRKVLAVNHVFEIILAYLEKGSWQEAFFTILPQRKGAVAVDQDGTAVQDKEEEDTDSDSDPDPTPEQTEKSPDGQLQTKL

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (91%)
Global pLDDT	86.65
Species	Barramundi
UniProt	A0A4W6FAG3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	323
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					73.7	187-233	47	1-186, 234-323	186	90

Model Sequence

Comments

Domain	Eukaryota
Family	Centropomidae
Species (Full Name)	Lates calcarifer (Barramundi) (Holocentrus calcarifer)
Gene	trmt10a
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR016653, IPR028564, IPR038459
PDB structures (whole Protein)	-

A0A4W6FAG3F1

AF4

Model Sequence

ESM1

Model Sequence