| Protein name |
GIY-YIG domain-containing protein
|
| Main knot |
81 (83%)
|
| Global pLDDT |
84.99
|
| Species |
Sporolactobacillus inulinus
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A4Y1Z9Q0
|
| PDB structures |
-
|
| Model length |
286
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.3 | 42-258 | 217 | 1-41, 259-286 | 41 | 28 |
|
Model Sequence |
MSCSHLNKNKALSSNRGDAEQLMEAFVESGSYKRLKELEKEGRTLRDRVRGCLSSGESRRYEIGSHLVAKFIPKKIYQYDYPGLNEYLYNLGLLQKLTILTSRNLNKDQKLLDLFEPYHLTPEYYVKPSFNRAGQELIKGERTPEVHVTLHDAAIRISQNRSQLKAVKAEYEKLKDELAQSNQLSVNKIVTYKYGSLSLRRKPLRYRIMHRTNQRIIHALIEFGKPSFDGIDHYLYKGIIKKSEFEAFRTLKDVRLDFVILDLDDEAKMQNYFHRKWTNHLLFLNE
|
| Protein name |
GIY-YIG domain-containing protein
|
| Main knot |
81 (75%)
|
| Global pLDDT |
85.55
|
| Species |
Sporolactobacillus inulinus
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
286
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
76.6 | 42-257 | 216 | 1-41, 258-286 | 41 | 29 |
|
Model Sequence |
MSCSHLNKNKALSSNRGDAEQLMEAFVESGSYKRLKELEKEGRTLRDRVRGCLSSGESRRYEIGSHLVAKFIPKKIYQYDYPGLNEYLYNLGLLQKLTILTSRNLNKDQKLLDLFEPYHLTPEYYVKPSFNRAGQELIKGERTPEVHVTLHDAAIRISQNRSQLKAVKAEYEKLKDELAQSNQLSVNKIVTYKYGSLSLRRKPLRYRIMHRTNQRIIHALIEFGKPSFDGIDHYLYKGIIKKSEFEAFRTLKDVRLDFVILDLDDEAKMQNYFHRKWTNHLLFLNE
|
| Domain |
Bacteria
|
| Family |
Sporolactobacillaceae
|
| Species (Full Name) |
Sporolactobacillus inulinus
|
| Gene |
NBRC111894_1185
|
| PDB structures (whole Protein) |
-
|
A0A4Y1Z9Q0