| Protein name |
Outer membrane lipoprotein
|
| Main knot |
820 (51%)
|
| Global pLDDT |
75.35
|
| Species |
Comamonas sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A4Y8TPP4
|
| PDB structures |
-
|
| Model length |
310
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
75.7 | 11-304 | 294 | 1-10, 305-310 | 10 | 6 |
|
Model Sequence |
MFHGAGKRGFAVTLGGLRGSAAFHSQSQQGSVKMNQVMSSWPQRGWRLLGGLLLVAGLAACGAPPSAQDALQVAESGSAAPRTPRVESTLGTQWGEGRESVTRTVEAARLDPERPRTVAQLRYSDEASIRRALGRSIDQQLSVQLADGDVEWVVQDGQGRPLPIYTMRGARDYQLAGRQGERYELVYSNRSQRHYEVVATVDGLDVLTGQAGSVHSAGYLLRPGETLRIEGFRKSQREVAAFRFAGKERAYAGNTPAGDARNVGVIGAALFEVRLQGRDAAQPAPERRGAAEPAAFPADGRYAPPPQYRR
|
| Protein name |
Outer membrane lipoprotein
|
| Main knot |
01 (86%)
|
| Species |
Comamonas sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
310
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MFHGAGKRGFAVTLGGLRGSAAFHSQSQQGSVKMNQVMSSWPQRGWRLLGGLLLVAGLAACGAPPSAQDALQVAESGSAAPRTPRVESTLGTQWGEGRESVTRTVEAARLDPERPRTVAQLRYSDEASIRRALGRSIDQQLSVQLADGDVEWVVQDGQGRPLPIYTMRGARDYQLAGRQGERYELVYSNRSQRHYEVVATVDGLDVLTGQAGSVHSAGYLLRPGETLRIEGFRKSQREVAAFRFAGKERAYAGNTPAGDARNVGVIGAALFEVRLQGRDAAQPAPERRGAAEPAAFPADGRYAPPPQYRR
|
| Domain |
Bacteria
|
| Family |
Comamonadaceae
|
| Species (Full Name) |
Comamonas sp. A23
|
| Gene |
EIC84_07050
|
| PDB structures (whole Protein) |
-
|
A0A4Y8TPP4