A0A4Z1PPN3F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (64%)
Global pLDDT
90.62
Species
Venturia nashicola
UniProt
Structure Prediction Model
AlphaFold v4:  A0A4Z1PPN3
PDB structures
-
Model length
257
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.3 16-238 223 1-15, 239-257 15 19
Model Sequence
MDPHAVESKKIWVPLENNPAVMNHLGRKLGASTTLSFTDVYSLTEPSLLAMVPRPVHALLFLYPGTVLSARDLAMELEDQEQYESCGPDEPVLWFHQTIGHACGLIGLLHCLTNGEAAKHILPGSDLHKLIEMATPLKPKERAQLLYDSDILEKAHKEAARTGDSRAPTIDEPVLYGFTAFVKGKDGHLWELEGQRKGPVDRGVLEEGEDVLSEKALQLGPLRIINREKASEQRFSCLALVDTDKSSAGLINNEAWN
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (75%)
Global pLDDT
89.03
Species
Venturia nashicola
UniProt
Structure Prediction Model
PDB structures
-
Model length
257
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.2 16-238 223 1-15, 239-257 15 19
Model Sequence
MDPHAVESKKIWVPLENNPAVMNHLGRKLGASTTLSFTDVYSLTEPSLLAMVPRPVHALLFLYPGTVLSARDLAMELEDQEQYESCGPDEPVLWFHQTIGHACGLIGLLHCLTNGEAAKHILPGSDLHKLIEMATPLKPKERAQLLYDSDILEKAHKEAARTGDSRAPTIDEPVLYGFTAFVKGKDGHLWELEGQRKGPVDRGVLEEGEDVLSEKALQLGPLRIINREKASEQRFSCLALVDTDKSSAGLINNEAWN
Comments
Domain Eukaryota
Family Venturiaceae
Species (Full Name) Venturia nashicola
Gene E6O75_ATG00741
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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