| Protein name |
Type I secretion protein
|
| Main knot |
819 (67%)
|
| Global pLDDT |
73.15
|
| Species |
Agrobacterium tumefaciens
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A4Z1Q9X6
|
| PDB structures |
-
|
| Model length |
672
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
85.3 | 292-592 | 301 | 1-291, 593-672 | 291 | 80 |
|
Model Sequence |
MHIDKISDMIAHFIGLFDTVIEEARLRANYTEGPAHSAPNRLPDDEAAKLLDKNYDVALKDYDPGVNYRAGYYDFDYLQPHFARMVEHDMQRLADAIPVDISGVNFRFPGRLSFEEEYELVVHTGPGSVIAHVAQVNILQDDDYLNMTDGPYVWRDTSFATERTVEFYNEASVFTPFAGFQRTDSYDALQALAKSAHDYIDHARENDVTSLGTGADQDFVLAGNDIDGLYINGSIASEKPMLDDYMPDRGIAKPAEEPEKSDVSLHEDSPAGNSLDVAAGANVVANIATLVNTGVMTSVTAVMGDYHQIDAITQAYIYSDRDEIDSVFTRSEDQAATAAFNIASFERSVYPGAESTENSSQENGEPPIFPTAWRVSVLEGDVSFVHWIEQYQFVSDNDTMTITTSGSTVSLLTGGNAALNIANFLGIGMQYDLIIVGGNVLDMNIISQIAVLYDNDWARANPDAPDGATIQSGNNLLWNDAAIHNVGSNDRFETMPDYMNQTVNAINERDPNMPDALAHDVDFAGYEGLNVLYITGNLYDVSIIKQVSVLGDSDDVTQAAAKVLENNEDATVHIDTGSNAVVNLAQIVDYDSFGSTTYVAGGVYSDAILIQGGIIENDTSQPQQGQLANEVIAFLHDDPATIENESNGVINAGHDLSWSNAHPADVMQTVVA
|
| Domain |
Bacteria
|
| Family |
Rhizobiaceae
|
| Species (Full Name) |
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
|
| Gene |
CFBP4996_16810
|
| PDB structures (whole Protein) |
-
|
A0A4Z1Q9X6