A0A519LBF3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium:solute symporter
Main knot	4₁ (61%)
Global pLDDT	87.37
Species	Flavobacterium sp
UniProt	A0A519LBF3
Structure Prediction Model	AlphaFold v4: A0A519LBF3
PDB structures	-
Model length	309
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.1	52-296	245	1-51, 297-309	51	13

Model Sequence

MNPGTILLLFVFVYFVGLLVISYFTSRNSDNQSFFIGNKKSKWWLVAFGMIGTSLSGVTFISVPGTVGKMTGSEYIFGGFEYYMMVIGFFIGYFIVAAVLLPLYYKMNLTSIYTYLGKRFNVEAHKIGSVFFIVSRAIGATARLYLVVNVLQIFLLEGLGVPFWLTAMVLLLMVLLYTFEGGVKTIVITDTLQTSFMIISLIACIVYILSNLNLSFNEAYTILGEKNYTHFINFDPNSKTFFLKTILGGIFITIAMTGLDQEMMQKNISVDNLQNSKKNMLTFAGTLLFVNLAFLFLGGLLYLFALQNG

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium:solute symporter
Main knot	4₁ (60%)
Global pLDDT	90.41
Species	Flavobacterium sp
UniProt	A0A519LBF3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	309
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.5	51-294	244	1-50, 295-309	50	15

Model Sequence

Comments

Domain	Bacteria
Family	Flavobacteriaceae
Species (Full Name)	Flavobacterium sp
Gene	EOO44_22650
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A519LBF3F1

AF4

Model Sequence

ESM1

Model Sequence