A0A519TW38F1

PAS domain S-box protein
AF6
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
86 (76%)
Global pLDDT
82.43
Species
Pedobacter sp
UniProt
Structure Prediction Model
AlphaFold v6:  A0A519TW38
PDB structures
-
Structure in AlphaLasso
Model length
883
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.39 27-712 686 1-26, 713-883 26 171 Knot
Model Sequence
MSHNLKDINRFNELIEAAPTATAIYHTRDLIIAAANQQMLDFFGVKEDIVGLTLSQAVPALDGQPFIGLLQRVYDSGIAYHSTQDAADLVIDGKLQTFYFNYTYKPLLDENGKTEAIIHSAIDVTDLVRAKKQVIETQERMERSLESAGIGTWELDPIGNQVHWDQRCMELFGFEGSEDILYNQVLDCIHPDDKQNVIEAVEQAVDPQLKGIYDIRYRTIGNATGKIRWVHCRGRAYFGTEGRAYRFAGTARDITIEVQTATNEQQLLALIKRSTGHMSIADMQGKLIYMNDAGRKMLGVPEDAKIDEMTAIDFYEVGELERVQKTIIPLIDDEKGWDGIITLKNCSTGETFPCHVNYILVKNPITGELIGRGATARDLRPELKASAELQRLATMVEISEDFCNYTDMQGNTIYINASGKNLIGAKDIDLSKANIYQYHSEESSKEIKEKILPILLEKGKWSGELELLHLHTHEIIPIHKQFFIIYDEINKAPIAIAGIARDLRAEITAKREMDDKNQQLNQAIGELRFLANSVPAVVWTATPDGMLDFINERWYERSAIPIEESLGTNWASTMHPDDLEETLSSWKISIETGSPYQVEFRLKDKLGAYRWWLVRALALCDDNGNIVKWYGSNTDITDQKELERQKDNFLGIASHELKTPVTSIKAYAQVLEMMLNRAGDTKNAALMSKMDKQINRLTALIADLLDVTKINTGRLKLENEEFDFNQLVEELIESVQFTTERHTINKELKFSRNLVGDRERISQVVVNLLSNAVKYSPDASRIVVYTEDHDTEVQLCVQDFGIGLSRDKKDRVFEQFYRVSGTKEHTFPGLGLGLYISSEIVKQLGGRIWVNSVEGKGSTFCFAIPVSQPKVEFISNTEKQKNA
Comments
AF4
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
86 (72%)
Global pLDDT
82.66
Species
Pedobacter sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A519TW38
PDB structures
-
Structure in AlphaLasso
Model length
883
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.4 28-713 686 1-27, 714-883 27 170
Model Sequence
MSHNLKDINRFNELIEAAPTATAIYHTRDLIIAAANQQMLDFFGVKEDIVGLTLSQAVPALDGQPFIGLLQRVYDSGIAYHSTQDAADLVIDGKLQTFYFNYTYKPLLDENGKTEAIIHSAIDVTDLVRAKKQVIETQERMERSLESAGIGTWELDPIGNQVHWDQRCMELFGFEGSEDILYNQVLDCIHPDDKQNVIEAVEQAVDPQLKGIYDIRYRTIGNATGKIRWVHCRGRAYFGTEGRAYRFAGTARDITIEVQTATNEQQLLALIKRSTGHMSIADMQGKLIYMNDAGRKMLGVPEDAKIDEMTAIDFYEVGELERVQKTIIPLIDDEKGWDGIITLKNCSTGETFPCHVNYILVKNPITGELIGRGATARDLRPELKASAELQRLATMVEISEDFCNYTDMQGNTIYINASGKNLIGAKDIDLSKANIYQYHSEESSKEIKEKILPILLEKGKWSGELELLHLHTHEIIPIHKQFFIIYDEINKAPIAIAGIARDLRAEITAKREMDDKNQQLNQAIGELRFLANSVPAVVWTATPDGMLDFINERWYERSAIPIEESLGTNWASTMHPDDLEETLSSWKISIETGSPYQVEFRLKDKLGAYRWWLVRALALCDDNGNIVKWYGSNTDITDQKELERQKDNFLGIASHELKTPVTSIKAYAQVLEMMLNRAGDTKNAALMSKMDKQINRLTALIADLLDVTKINTGRLKLENEEFDFNQLVEELIESVQFTTERHTINKELKFSRNLVGDRERISQVVVNLLSNAVKYSPDASRIVVYTEDHDTEVQLCVQDFGIGLSRDKKDRVFEQFYRVSGTKEHTFPGLGLGLYISSEIVKQLGGRIWVNSVEGKGSTFCFAIPVSQPKVEFISNTEKQKNA
Comments
Domain Bacteria
Family Sphingobacteriaceae
Species (Full Name) Pedobacter sp
Gene EOO90_19690
PFAM codes  PF00512,  PF02518,  PF08447,  PF08448,  PF13426
InterPro codes  IPR000014,  IPR000700,  IPR001610,  IPR003594,  IPR003661,  IPR004358,  IPR005467,  IPR013655,  IPR013656,  IPR035965,  IPR036097,  IPR036890
PDB structures (whole Protein) -
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