A0A521KIL6 | AlphaKnot 2.0

AF4

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Information

Protein name	tRNA 2-selenouridine(34) synthase MnmH
Main knot	3₁ (79%)
Global pLDDT	91.36
Species	Planctomycetes bacterium
UniProt	A0A521KIL6
Structure Prediction Model	AlphaFold v4: A0A521KIL6
PDB structures	-
Model length	395
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.3	13-163	151	1-12, 164-395	12	232

Model Sequence

MPATSIRPVRGVPSATVAQVLAAREPLVIDVRAPVEHAVDCFPGALCVPLFDDAERALIGTAYRHESPEAAFTRARELMRSHIDPLVRSIAARAGHALGDAAIEQRFVERTASGFDALQRELRTQPLDALPEHAVVLACWRGGMRSRSLASFLRELGLERACILEGGYRAWRAHVAAGLDALALTPPVFVLRGLTGVGKTLVLRAIERLRPEWVLDLEALAEHRSSVLGMVGLTPASQKKFESRLWRRCSRGFGAAIVLEGESRKIGDAILPTRLWTALCSGTCIELATTLDRRIDVLLDDYLEHPDSRTQLRRQLPFIEQRIGPVQWAGKLVALLDEHRERELVSVLLDLYYDPLYRHSEKAFSLSTRIDSTSPAHAARECIAFIESHLSLRSP

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA 2-selenouridine(34) synthase MnmH
Main knot	3₁ (75%)
Global pLDDT	92.49
Species	Planctomycetes bacterium
UniProt	A0A521KIL6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	395
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.3	13-163	151	1-12, 164-395	12	232

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Planctomycetes
Species (Full Name)	Planctomycetes bacterium
Gene	mnmH EPO68_06580
PFAM codes	PF00581
InterPro codes	IPR001763, IPR027417, IPR036873
PDB structures (whole Protein)	-

A0A521KIL6F1

AF4

Model Sequence

ESM1

Model Sequence