A0A523S278F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
AF4
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Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (78%)
Global pLDDT
96.18
Species
strain OWC
UniProt
Structure Prediction Model
AlphaFold v4:  A0A523S278
PDB structures
-
Model length
234
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.6 151-200 50 1-150, 201-234 150 34
Model Sequence
MLHIILLDCALEFVPSEISSMKQVQKHAFRRGKKPTELLLDQTHHGRAMTKLSESERRGRPDITFLSLMSILETPLCKEGLLNVFLHLQDGRIIEVRSDVRLPRNYERFVGLMEQLLLTGRVPPKGDALLHVIDKSLGDLVKDLNAEQTILAIEGGQKTTIHDLTESLPTDTSVPIIVGVGAFPHGDLPDSTTSLFEHKLEFDKDVMMAWHVCAELLWAYSSRVGVVKTRYSVI
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (75%)
Global pLDDT
93.38
Species
strain OWC
UniProt
Structure Prediction Model
PDB structures
-
Model length
234
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.8 151-200 50 1-150, 201-234 150 34
Model Sequence
MLHIILLDCALEFVPSEISSMKQVQKHAFRRGKKPTELLLDQTHHGRAMTKLSESERRGRPDITFLSLMSILETPLCKEGLLNVFLHLQDGRIIEVRSDVRLPRNYERFVGLMEQLLLTGRVPPKGDALLHVIDKSLGDLVKDLNAEQTILAIEGGQKTTIHDLTESLPTDTSVPIIVGVGAFPHGDLPDSTTSLFEHKLEFDKDVMMAWHVCAELLWAYSSRVGVVKTRYSVI
Comments
Domain Archaea
Family Asgard group
Species (Full Name) Thorarchaeota archaeon (strain OWC)
Gene nep1 E3J86_00925
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR023503,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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