A0A525D6W1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (46%)
Global pLDDT	88.2
Species	Desulfobacteraceae bacterium
UniProt	A0A525D6W1
Structure Prediction Model	AlphaFold v4: A0A525D6W1
PDB structures	-
Model length	342
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.8	24-251	228	1-23, 252-342	23	91

Model Sequence

MIELKHDHLVFSFPDIHPDAKISIGFQRTLRIPDDGKTYPLPPGLGVFPLKHIDDYTVPPAWARHGGVMLPMYQSEAMWINFNTTYIPDRGTAYPFAVKVATGKIDALTGTPWKNKLTRDPQDYMISTRQPWLDGYCVEKDLIRQFVAMPLGSGYSAEEQITGRAEHGGLQIIVYPMRKEVFERRFPKIERTAVMEPFIGAPAAGEAVLCEAESFDMGLAPGGKMHQEIYEDPFNFNDWDRDTHSRCFIHIANSLVWRAITGDVPPTVPFTAKEYTNSGLPWFEYYDDQAKSIDGSNILAKLKSVIQKGMDKGENPLPENQGVTPDNIRVIKPGNRVREGDF

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (54%)
Global pLDDT	63.96
Species	Desulfobacteraceae bacterium
UniProt	A0A525D6W1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	342
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.8	26-268	243	1-25, 269-342	25	74

Model Sequence

Comments

Domain	Bacteria
Family	Desulfobacteraceae
Species (Full Name)	Desulfobacteraceae bacterium
Gene	D3926_12465
PDB structures (whole Protein)	-

A0A525D6W1F1

AF4

Model Sequence

ESM1

Model Sequence