| Protein name |
DUF2135 domain-containing protein
|
| Main knot |
41 (61%)
|
| Global pLDDT |
80.81
|
| Species |
Bradyrhizobium sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A525HZT3
|
| PDB structures |
-
|
| Model length |
230
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
84.1 | 19-219 | 201 | 1-18, 220-230 | 18 | 11 |
|
Model Sequence |
MVRLANLAMATAFVLAGQCAVFADDAKTGDPNPPDTVKVDVLRGDRWIYELRDDITNELKSIVDVAVTDVTDSEIDTRVRFTNATTNAESNVVQVFDPRWRLKENGNFTYRPADDETGIPADLQVGKTWTYRFELLRANPVGTFNYAGKAKVEAWEHVAVANGLSYDAFKIVLGSALTPVVNNRKLEAKVVLWYAPAVNRIVKSTFESRTNGKLLEATDLTLRDYQRRQP
|
| Protein name |
DUF2135 domain-containing protein
|
| Main knot |
01 (89%)
|
| Species |
Bradyrhizobium sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
230
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MVRLANLAMATAFVLAGQCAVFADDAKTGDPNPPDTVKVDVLRGDRWIYELRDDITNELKSIVDVAVTDVTDSEIDTRVRFTNATTNAESNVVQVFDPRWRLKENGNFTYRPADDETGIPADLQVGKTWTYRFELLRANPVGTFNYAGKAKVEAWEHVAVANGLSYDAFKIVLGSALTPVVNNRKLEAKVVLWYAPAVNRIVKSTFESRTNGKLLEATDLTLRDYQRRQP
|
| Domain |
Bacteria
|
| Family |
Nitrobacteraceae
|
| Species (Full Name) |
Bradyrhizobium sp
|
| Gene |
E7774_16945
|
| PDB structures (whole Protein) |
-
|
A0A525HZT3