| Protein name |
DNA-directed DNA polymerase (EC 2.7.7.7)
|
| Main knot |
Unknown (55%)
|
| Global pLDDT |
79.38
|
| Species |
Thaumarchaeota archaeon
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A533W8Y4
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A533W8Y4: L0
|
| Model length |
1132
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
77.4 | 113-733 | 621 | 1-112, 734-1132 | 112 | 399 |
|
Model Sequence |
MRGWILDLYPGNPGEMVVWLKLENGEVRRLLDRWSPSIFVASDDGYELARLGGHRLIEPEVLGSRLVGKVEQITDQAKSEVLELQVKDAKKTQLLARRIEGLGPFGLYRIYNADVPPAQTYLYERDLFPLAHCEVSEAAQRLEWRLHDDDWSYDYVIPELRETKVEVEVEREGRIARNTDTIRSVKLTSREEEIVIESGSEGEKILEVVKALEELDPDLLLTEEGDTFLLPYLIKRAEKNGLSERFFLDRDKTRLTLPSRAGTSYFSYGKILFKPSAMKLCGRVHLDLSSSFVCNGPNLEGLFELSRICRMPLQTASRASIGKALSSLQFYHASKMDLLVPWKPVIAEKFKDRWTLMVADRGGFIFEPRVGLFEGVGELDYSCLVKDSTVMTRNGEKSIAEVKEDNEVFTPFGWQRVSKVHEYRINEKVIRLTLSDGKRITCTTHHKFPVLVRDVFEEKVADEIRKGNRFIITDPPPAFQNDDLACLFGAFTAEGGRLRRDQEYFDKSRKKTRVSHQYRIEFSINKHEIDFRNFITKTLSKIYPSVHVYIKTKLGSDGITLVVAQRAVVMDFLSRYESFIASEHHNQGEQASFVRGFFEGDGGINKKRNTVQCDQSSKNHFKLDIVCKCLRELNIGYRVGRYINKHGFSSIPADFLELSGLEAVVRYYTQVGFISQDKQESLRQAILSRIRKAKNYPSPRLGLYAKARKNNALSFIHEVRVIGKEIFDYDGHVYDLTLEWSEFPYYFANGILTHNSLYPNIMLKKNLSAETVRCPCCPSSINRIPELDWNVCQRRKGIVPKAIEIIVGKRLRYKELKRSAKSDKDRERYDARQSALKYLGVTSFGYLGYNNAKFGRIDAHIGVCAWDRKVLLDATRIAERSGFKLIHGIVDSLWLKRQGAEEEDYKRLRREIEEETGFEISFEGIYKWVVFLPSRVEPGIPVLNRYFGAYRTGELKVRGIEARRHDTPVLFTKCQMEILELLARADSIAGARELIPECLGVFEKYARAISNREVPPEFMIFTRNLSKKPGEYLNRTIQSSVADQLSEEGIELHAGESVRYLITDYYSGSPRRRAAPESLIDDGTPYDVRRYVELLAEACSTVLEPFDGRCSPERLVGRLQDTQLASSPAEVM
|
| Domain |
Archaea
|
| Family |
unclassified Thaumarchaeota
|
| Species (Full Name) |
Thaumarchaeota archaeon
|
| Gene |
E6K90_00010
|
| PFAM codes |
PF00136
|
| InterPro codes |
 IPR003586, IPR003587, IPR006134, IPR006141, IPR006142, IPR006172, IPR012337, IPR023211, IPR027434, IPR030934, IPR036397, IPR036844, IPR042087, IPR043502
|
| PDB structures (whole Protein) |
-
|
A0A533W8Y4