A0A533WRI6F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
AF4
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Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (83%)
Global pLDDT
92.57
Species
Thaumarchaeota archaeon
UniProt
Structure Prediction Model
AlphaFold v4:  A0A533WRI6
PDB structures
-
Model length
238
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.6 151-198 48 1-150, 199-238 150 40
Model Sequence
MTLIIAEAALETVPREIASHAAVRNHAHSLGRHPSETLLDRSYHHAAMSRLQDNSKRGRPDIVHFALMEALSTPIFVKCKLRVYVHTIDDKLITIADNLRIPKSFFRFEGLAMGLFRDKVVKSDQGAVLMEISDGTFEDLLNVVKPERVIGLSTTGVQSNAEKVVAENLVDDCALVVGGFPRGHFSESTTRLLNLTYSISDIALEAHVVIARILYECEKLLEKGIHHEGDEKRRQVRA
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (83%)
Global pLDDT
92.58
Species
Thaumarchaeota archaeon
UniProt
Structure Prediction Model
PDB structures
-
Model length
238
ESM generation time
AlphaKnot deposition date
2023-06-28
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Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.2 151-198 48 1-150, 199-238 150 40
Model Sequence
MTLIIAEAALETVPREIASHAAVRNHAHSLGRHPSETLLDRSYHHAAMSRLQDNSKRGRPDIVHFALMEALSTPIFVKCKLRVYVHTIDDKLITIADNLRIPKSFFRFEGLAMGLFRDKVVKSDQGAVLMEISDGTFEDLLNVVKPERVIGLSTTGVQSNAEKVVAENLVDDCALVVGGFPRGHFSESTTRLLNLTYSISDIALEAHVVIARILYECEKLLEKGIHHEGDEKRRQVRA
Comments
Domain Archaea
Family unclassified Thaumarchaeota
Species (Full Name) Thaumarchaeota archaeon
Gene nep1 E6K88_06870
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR023503,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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