A0A534TQT4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (94%)
Global pLDDT	80.47
Species	Deltaproteobacteria bacterium
UniProt	A0A534TQT4
Structure Prediction Model	AlphaFold v4: A0A534TQT4
PDB structures	-
Model length	258
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.0	151-193	43	1-150, 194-258	150	65

Model Sequence

MAHVSRRRPPRPWPGPVRPVDPADLVGPRGLTEEVLREDCCDAPESGPAQFFWSLLTTERRTRIQSVVDARLQSVTVVLDRLLDPHNTAAILRTAEGLGLSRAHVVAHAAGDAVAHRRVTQDAHKWIDVEAHPGGETAAEKLRADGYEVWAGHLDAGGRLYTTLPADRPVALLFGNEHEGPSPATVRACTGTFRIPMAGFTQSFNVSVAAGIALAWLADARRRHLGQPGDLSGEARVQLRDRYTLLAARLARRMKAGR

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (90%)
Global pLDDT	85.4
Species	Deltaproteobacteria bacterium
UniProt	A0A534TQT4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	258
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					51.0	151-193	43	1-150, 194-258	150	65

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Deltaproteobacteria
Species (Full Name)	Deltaproteobacteria bacterium
Gene	E6J67_01625
PFAM codes	PF00588
InterPro codes	IPR001537, IPR029026, IPR029028, IPR033671
PDB structures (whole Protein)	-

A0A534TQT4F1

AF4

Model Sequence

ESM1

Model Sequence