A0A537D9D2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Nitrate reductase
Main knot	4₁ (65%)
Global pLDDT	83.96
Species	Betaproteobacteria bacterium
UniProt	A0A537D9D2
Structure Prediction Model	AlphaFold v4: A0A537D9D2
PDB structures	-
Model length	313
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.7	33-283	251	1-32, 284-313	32	30

Model Sequence

MTIPNASPSLYNEDLAPATERKWGAFSIFNVWTSDVHSLWGYYLAASLFLLCGNFLNFIIAIGLGSLVIFFLMNLVGYAGVRTGVPYPVLARSSFGIWGANVPALVRAVVACFWYGAQTAAASGAIVALLTRSEGIMAFHKSTHFLGHSGLEVICFVIIWALQLLIIQRGMETVRRFQDWAGPAVWVMMLILAIYLLVKAGSFSFGSGIPRDVLLEKTKDAGIPGEPGSIASLGAVAATWITYFAALYLNFCDFSRYARDEAAVRKGNIWGLPVNLILFTLVAGVTTTAAFTVYGEVLLHPDQISAKFDSWFL

Comments

ESM1

Categories voted by users:

Information

Protein name	Nitrate reductase
Main knot	4₁ (69%)
Global pLDDT	88.11
Species	Betaproteobacteria bacterium
UniProt	A0A537D9D2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	313
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.4	35-283	249	1-34, 284-313	34	30

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Betaproteobacteria
Species (Full Name)	Betaproteobacteria bacterium
Gene	E6H46_04095
PFAM codes	PF02133
InterPro codes	IPR001248, IPR045225
PDB structures (whole Protein)	-

A0A537D9D2F1

AF4

Model Sequence

ESM1

Model Sequence