A0A540VSM3F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (77%)
Global pLDDT
93.12
Species
Spiribacter salinus
UniProt
Structure Prediction Model
AlphaFold v4:  A0A540VSM3
PDB structures
-
Model length
224
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.0 151-196 46 1-150, 197-224 150 28
Model Sequence
MDLPDSAVRHLQARRLRSGDGLVLFDGTGGEYTATLVDLQRRRAQARIDAHTPREAEAPVAVTVLQGISKGERMDYAMQKATELGVARIIPVISERCVVRLDSERWAKKQRHWQAVAIAACEQCGRNRIPSIDSPCSLETGLAEVDGLPGVIFDTEGDRAARDLKPTEQLATLIGPEGGLAPEEIQRVADLGWQRIRLGPRILRSDTAPVAALAVIQTVIGDLG
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (75%)
Global pLDDT
94.42
Species
Spiribacter salinus
UniProt
Structure Prediction Model
PDB structures
-
Model length
224
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.3 151-196 46 1-150, 197-224 150 28
Model Sequence
MDLPDSAVRHLQARRLRSGDGLVLFDGTGGEYTATLVDLQRRRAQARIDAHTPREAEAPVAVTVLQGISKGERMDYAMQKATELGVARIIPVISERCVVRLDSERWAKKQRHWQAVAIAACEQCGRNRIPSIDSPCSLETGLAEVDGLPGVIFDTEGDRAARDLKPTEQLATLIGPEGGLAPEEIQRVADLGWQRIRLGPRILRSDTAPVAALAVIQTVIGDLG
Comments
Domain Bacteria
Family Ectothiorhodospiraceae
Species (Full Name) Spiribacter salinus
Gene FKY71_07030
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028
PDB structures (whole Protein) -
How to cite