A0A542AYI7F1

TrmH family RNA methyltransferase
AF4
Categories voted by users:
Information
Protein name
TrmH family RNA methyltransferase
Main knot
31 (81%)
Global pLDDT
92.83
Species
Gramella sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A542AYI7
PDB structures
-
Model length
270
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.6 36-149 114 1-35, 150-270 35 121
Model Sequence
MLKKITSLQNREIKWLLQLQEKSRSRRKENAFLVEGLRETSLAVAHHYELLHLYYVPEKIEFQEVLDLVKKGDQNTEQITELSQEVYEKIAYRGSTEGVIAVFRSQENKLEDLDFSSTSPLILVAEAPEKPGNIGAILRTADAAGVDAVIIANPKTDLYNPNIIRSSVGCVFTNKIATGETSEIIEFLRNKNINIYAAILQAARPYHEIDLKGPTAIVVGTEATGLSEEWREHSLQNIIIPMQGAIDSMNVSVAAGILIFEARRQRGFNL
Comments
ESM1
Categories voted by users:
Information
Protein name
TrmH family RNA methyltransferase
Main knot
31 (80%)
Global pLDDT
93.43
Species
Gramella sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
270
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.0 35-120 86 1-34, 121-270 34 150
Model Sequence
MLKKITSLQNREIKWLLQLQEKSRSRRKENAFLVEGLRETSLAVAHHYELLHLYYVPEKIEFQEVLDLVKKGDQNTEQITELSQEVYEKIAYRGSTEGVIAVFRSQENKLEDLDFSSTSPLILVAEAPEKPGNIGAILRTADAAGVDAVIIANPKTDLYNPNIIRSSVGCVFTNKIATGETSEIIEFLRNKNINIYAAILQAARPYHEIDLKGPTAIVVGTEATGLSEEWREHSLQNIIIPMQGAIDSMNVSVAAGILIFEARRQRGFNL
Comments
Domain Bacteria
Family Flavobacteriaceae
Species (Full Name) Gramella sp. Hel_I_59
Gene JM79_2304
PFAM codes  PF00588
InterPro codes  IPR001537,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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