A0A553IAU4F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (69%)
Global pLDDT
88.33
Species
Xylaria flabelliformis
UniProt
Structure Prediction Model
AlphaFold v4:  A0A553IAU4
PDB structures
-
Model length
265
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.4 12-253 242 1-11, 254-265 11 12
Model Sequence
MVAGKKHFIPLESDPVLFTELIHTLGVSSRLAFHDLLTLSPSDAELLAPVPRPALALILVIPAPDGYTERLAEEEKDVPVHDAKGDEEDAVFYEQTIGNACGLFATLHALSNGDARGFLDTAVDRYTDNPSEPNSHIARLVEHCAPLNRAQRIEALESDEQLEAAHASVASRGSTAPPEDITKHALFAYMTFVKSRKSGRLYQLEGCRKGPVDLGCVLSEDEDMLSEKALNAVRKFVEEAGKGIAFGYSAMALSVSPEERSDVLV
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (68%)
Global pLDDT
87.66
Species
Xylaria flabelliformis
UniProt
Structure Prediction Model
PDB structures
-
Model length
265
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.1 11-252 242 1-10, 253-265 10 13
Model Sequence
MVAGKKHFIPLESDPVLFTELIHTLGVSSRLAFHDLLTLSPSDAELLAPVPRPALALILVIPAPDGYTERLAEEEKDVPVHDAKGDEEDAVFYEQTIGNACGLFATLHALSNGDARGFLDTAVDRYTDNPSEPNSHIARLVEHCAPLNRAQRIEALESDEQLEAAHASVASRGSTAPPEDITKHALFAYMTFVKSRKSGRLYQLEGCRKGPVDLGCVLSEDEDMLSEKALNAVRKFVEEAGKGIAFGYSAMALSVSPEERSDVLV
Comments
Domain Eukaryota
Family Xylariaceae
Species (Full Name) Xylaria flabelliformis
Gene FHL15_001589
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
How to cite