| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (82%)
|
| Global pLDDT |
86.24
|
| Species |
Danionella translucida
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A553REZ3
|
| PDB structures |
-
|
| Model length |
334
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.0 | 25-237 | 213 | 1-24, 238-334 | 24 | 97 |
|
Model Sequence |
MTLQTNGGRKRNVFLEMAGSAGEWCLMESDPGVFTELIKGFGCKGAQVEEIWSMEPENFENLKPVHGLIFLFKWQQGEEPAGSIVQDSRLDQIFFAKQVINNACATQAIISVLLNCTHPDVLLGETLTEFKEFSNSFDAAMKGLSLSNSEVIRQVHNSFARQQMFEFDAKSSPKEEDAFHFVSYVPVDGRLYELDGLREGPIDLGVCNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYERRIVELQAQLTEEEPMDTDQSANHLSSIQSEIAKYQMLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEYQQLIPLVEKVSE
|
| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (86%)
|
| Global pLDDT |
87.01
|
| Species |
Danionella translucida
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
334
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
70.1 | 26-237 | 212 | 1-25, 238-334 | 25 | 97 |
|
Model Sequence |
MTLQTNGGRKRNVFLEMAGSAGEWCLMESDPGVFTELIKGFGCKGAQVEEIWSMEPENFENLKPVHGLIFLFKWQQGEEPAGSIVQDSRLDQIFFAKQVINNACATQAIISVLLNCTHPDVLLGETLTEFKEFSNSFDAAMKGLSLSNSEVIRQVHNSFARQQMFEFDAKSSPKEEDAFHFVSYVPVDGRLYELDGLREGPIDLGVCNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYERRIVELQAQLTEEEPMDTDQSANHLSSIQSEIAKYQMLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEYQQLIPLVEKVSE
|
A0A553REZ3
IPR001578