A0A559VAB7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (47%)
Global pLDDT	78.53
Species	Streptomyces sp
UniProt	A0A559VAB7
Structure Prediction Model	AlphaFold v4: A0A559VAB7
PDB structures	-
Model length	387
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.5	50-310	261	1-49, 311-387	49	77

Model Sequence

MAEPYGGQRAFSVRERRGGAGTEGRGSGSVADTGVRIDGNTLRLPGGVAVRFIRTLRLPETGTHPLPPGLGEFPVRRVSDYADRVPAQWRARGGVMLPVYLREAMWLSFAGTQEPAALQVGVGKVCAVSGKPWRDRLSRDPQNYVVLPRQPWLDGINSGKGTVRQFVAVPLGLGATVEGQVTGEEVWGGVQLQSFPLTDGALGEWRRLERERKARAAGKFHGYGAPHPMAAAAPGGPLPPPSAPGAVAAPGGPAAAPPRRAAAMGLGVGGSMRQEVYEDDRPLTDWCGTPSGRVFVHLVTPPEWRRITGEAPPPSPVDRAAYTSAGLPWFDYYDEDAEDLAPTETLEGVKPVGDWLGDDLEPWQEPHPDQVAPLKDAPGKAIEDGEW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	3₁ (56%)
Global pLDDT	69.47
Species	Streptomyces sp
UniProt	A0A559VAB7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	387
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					66.7	118-276	159	1-117, 277-387	117	111

Model Sequence

Comments

Domain	Bacteria
Family	Streptomycetaceae
Species (Full Name)	Streptomyces sp. BK340
Gene	FB157_10335
PDB structures (whole Protein)	-

A0A559VAB7F1

AF4

Model Sequence

ESM1

Model Sequence