| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (91%)
|
| Global pLDDT |
89.51
|
| Species |
Euhalothece natronophila
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5B8NP20
|
| PDB structures |
-
|
| Model length |
248
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.8 | 83-133 | 51 | 1-82, 134-248 | 82 | 115 |
|
Model Sequence |
MTDSCLTQIRIVLVEPAGALNVGAIARVMKNMGLGQLILINPQCDPNSAEAKQMAVHGSDILGNAQIVTSLAEALVGCKLAVATTARDRALSLSLQSPTDVLPQLLNVPSALIFGREDSGLTNEELTHAQHSIYIPTASTYPSLNLATAVAICTYELQKLVTADSSTLPESPAQETVTLDALEGYYQHLEQLLLKIGFLYPHTASAKMKKFRQLFNRANLTPEELALLRGILRQTEWAIHNSDVVHEE
|
| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (92%)
|
| Global pLDDT |
92.73
|
| Species |
Euhalothece natronophila
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
248
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
98.7 | 83-133 | 51 | 1-82, 134-248 | 82 | 115 |
|
Model Sequence |
MTDSCLTQIRIVLVEPAGALNVGAIARVMKNMGLGQLILINPQCDPNSAEAKQMAVHGSDILGNAQIVTSLAEALVGCKLAVATTARDRALSLSLQSPTDVLPQLLNVPSALIFGREDSGLTNEELTHAQHSIYIPTASTYPSLNLATAVAICTYELQKLVTADSSTLPESPAQETVTLDALEGYYQHLEQLLLKIGFLYPHTASAKMKKFRQLFNRANLTPEELALLRGILRQTEWAIHNSDVVHEE
|
A0A5B8NP20
IPR001537